Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma01g01318 ATGCCGCTGTCGAAGTACCGCGTGCGGAACGAGTACAGCTTGGCGGATCCCGAGCTGTACCGCGCCGCCGACAAGGACGATCCCGAGGCGCTTCTCGAAGCCGTCGCCATGGCGGGCCTCGTCGGACTCCTGCGCCAGCTCGGCGACCTCGCCGAGTTTGCTGCTGAGATCTTTCATGATTTACATGAAGAAGTAATGGCTACTGCTGCAAGAGGCCATGGTCTTATGGCTCGTGTTAAACAGCTTGAGGCTGAAGTTCCCTCACTAGAGAAGGCGTTCTTTTCTCAAACTCATCATTCTTCATTCTATACTAATGGAGGGATTGATTGGCATCCAAATCTACGGTTTGAACAAAATCTTGTGACTCGTGGAGACTTACCTCGATTTATAATGGATTCATATGAAGAATGTCGTGGTCCTCCTAGACTGTTCCTGCTGGATAAGTTTGATGTAGCTGGGGCTGGGGCATGTCTGAAGCGTTATACTGATCCGTCATTCTTTAAAATGGAATCAACTTCATCTGTAACTGCTACAATAGAAGTTCAGAGAGAAAAGAGAATTCGTAAAGTAAAGCTGAAGAAAGGAGCACGACTGAGGGATGGTGAAACCCCTAATGCTGTACCATCACATGCAAAATTACATCAGCTGCTTCTTGAGGAGCGTATTGAGAATGGTTATAGTAATCCTGCACGCCGAGTGAAGTTGAAGAAAAGACAATTGAATGGACCAGCTGTTGAAACAAGAGATGGGAAGAGTTACATGGAGAAATTTCTGGAAACTCCTTCACCTGATCATAAAATGGTTTGTGAAACTTCAATCTTTCCATTGCCTGTGAAACAGACACCGTATGATACTAGTGAGGCTGGGATTAAAATTCTTGAAATCAGCAGCATTAGTCCTGTGAAAAAGTCATTGGGAAATAAAAACACCTATTCATCCCCTGATGAGAATGAATTAGAACTAAAACCATTTTCAGAAATGGATGGTGGGACAAATGAAGATCTTGTGAAGGTGAAAGAACAAATCTCAGATGGTGTGACAGACAAGAAGTCTTCTAATCATCTTAAGTTGCCTGATGCAGCAGAATTGGCTATCAATGAACAAAAGAAAATAGAAGGCAGCTTAGATGGGCACCATTCTGATGATGTGACTAGTGAAGTTGACAATTACATGGATGCTTTAACTACAATGGAATCAGAACTGGAAACAGACAATGAGTATAAACCTAAGAATAGTTTCTTGAATATTCAAAAGGCAGCAAATACTAATGATAAAGAAGAACATCAATTACAAGCTCAATTTTCAGATTCTCAATCATTTGGGGACTCCTCAATGTCTGATGACAGTAGTTCTTTCAATCAAGATAGAAACGAAGAACATATTAAAGTGGAAGCTCAGTCTTCAGATTCTCAATCAACTGGAACCTCATCTACATTAGATGATAATAGTTCATTCAGAAGAGATGGAAATGGGCAGCATAGAGAACCGCAAGCTCACTTCTCAGATTCTCAATCTGTTGGTAGCTCCTCTACATCAGACGAAAATTTCAAGAAAGATAAATCCTATTTACCTCACTCTGATTCGTTAACCACCGCAGTTGAAAATATACAATCGGAACCTATATTATTCACAAATGCCAAGTGTTGTGAACTGAAGGTTGAAGATGCACCATCCAACCAGCTTCCCCAAAATGTTGAGTTTCAACACACAGATTGTGAGAGGTTTGTCATGCATGATGATGCACCGGTTCATGAAGAAGAGATTTCATCTGATTTGGGGCAAGCCTCTTCAGATTTGATGACTTCAGGGCAGGTGTTGTGTTCTAATCTTGGATCCACCTTGCCAGTGATCCTACCTGCTGCAACTCAATCAGATGAAACCCCATCTGCCCCTGCTGAACTTAATTTAAGATTAGATGATGACAATGCAGACAGAACAGGTCTTGTTGAATCTATTTCTTCCAAACCTGTTTCTCTCTCCCTAACAGATGATGCTCACCCAGTGGGTTCTTCTGCTAAAACATCATTAGACAACTTGGATGATGATGACCCATATATTCATTGTGATGATCTGTTACAAGTTCTTAATGATTTGGAATTAGCTCATGGAGATGAATGCAGTGATCATTCTGAAATCAAAATGTCCCAGGCAGAGCCTCCCAAAGAAAATCCTTCTAAAATTTTGGTTAATAGAGATATTGGTTCACCAGTAGAGGATCCTGTTTCCCCATCCATGGAAGAATTAAACTTGAATTCAGGTGCTACACTGGCTCATGATTGTCAAGACTCAAAAGATGAAGATTGTACTGTAACTACCCAACTTAATTCGGAGACTCCTGTTTCTCCATTGAGTTGCTTTACCGGGGGGCTATTATCTGATTCAACTCATAACAACACTCAAGATGAACCGGGCTCAGCAGAAATTGAAGTCTCATCTTCTGATCTCCAATCAAAAGTTGGAGAGATACCAAAGATGGTGCATGATGATGAAATAAATGGATCCACCTTCAGTGTCAATCCAGTTGAAGATGATGGTCATTTTAAACGTTCATCTCCTGATAATCATGTGATGGTAAATGATCTGGTCACTGAAAATGTTCAGTCAGATGATCAAGCTGTGTATTCTGCTCCTTCTGTTGATAGTGCTGAAAATGATGAGGGTGTTGTTAGTTGTCCAGCTTCAAGTCAGATTTGTTCTCCATCAAGGGGTCTTTCAGATTTGGAAGAGCCTCCGTTGAGTTCTCATTCTTATCCAATGGAAATAAAATCCAATGAAGTAGAATTGACGCAAATTGCCATGGTCACAAATGCTGAGAAGAGTGAAAATCAATCAGCACCATTGCTAGATGTAGCGTCATCTGATGTCGTAAATTCTTCATTGAGTAATATTACAAAGTTAGAAGAATCTCTTTCTACCTTTGCAGATTCACAGAAGAAAGAGATAGAAGTTGATGAGGCAGTTGCTAGAGATTCTTTGACAGAATTAGAGGAACAGAAGATAGTGGATCAGCCAGAAATTGCTTCTGTGGATGTACAATTGAACCTGAACAAACTGGTTCCCTTTGATCTTCCAGATTCAGAAATATGTAATAATATTCAAAAGTCATCTCCAAGGGAGAAATTCCAACATGGTGCTTTTGTTGATGATGCAGAAATGGTGCCTAAATTTTTGGGGTTAGATGCCCAGCAATCAGAATCATTATCTTATGGCCTGCATGATCCATTACAAAATGACAGAGATGGTTTTTCATCACCTTCTGGTAACCAGTTGGAACCTGAAACTGATTTAGATCTGTTCTCAAAATCTCAAATTGGTGAACAGGATGCAGAATTCCCACTCAGAGAGGAGAAAAACTTTGCCTCTGAAAAACCTCAATTTCAGCAGATGCAGAAATATCAATTGGAGCAAGAAAGCACTAATGCTACTTCTGACTGCGTATCAGAAATCCATGCAGATGAGCCATCATCATTTTATTCCTTGCCACAGTCATCTAGCCAGGAGAATAATGCTGCAAAACGTGTCATGGATCCATTGAAGCCTCTTCTTCCTAACCTCTTTCCCAAGGCAACTGAAAATAAACTTGATGAGATGCCACCCATGCCTCCTCTACCGCCTATGCAATGGAGAATGGGCAAGGTTCAACATGCTTCCCTAGCTTCGCAAAGAGAAGAGTTAGAAGTAAGTCAGGTCTCAGTCCAGCCAAATAGACCTGATAAACAATCTCTATTTGGTTTGCCAACTTCTGAGAGAGAGACCTTGTATCAGAATCCTTTTTTGCCTGTCATGGCTTTGGAAAGTGATAAGCTCCAACATTCTTCTGGGTTTGCTGTTGGTGTTTCAGGGCACCCTGTTGCTATACCTTTTCAATTTCCTATCATGGTTAATGAATCAAAAGGTCAATATAATTACCTATTGCTGGACAGCAACCAAATTCAAAACCCCTTGTTAACATTACCCGTGGCATCTATGGGCATGCCTCCTCAAGGTTTCATTGTTGCTCCTGAGGGAGAAGTGATACAGAATTCAAACCCATGCGCACCAATACCATCTGCTGCATATGCTGTTTTAGGACACAATTCCATCCCTCCACAAGAAAAATCAACTCAACCTCCACATCAGTTAATGATGGAGACTACTCCAGATGATAAATCACTTCAACAGAGTATGAGTAATATGGTATCTATGGACAGGCCTCCACATGGTCATGCAGTTGCTTCTGAGGGAGAAATGGAACTGAACTCAAACCCAGGCCCTACAATTCCACCGGCTGAATGTGCTGTTTCTGGACATGATTCTCTCTCACCTCAAGAAAAACTGACTCAACCTCCAAGTCAATTACTGATGGAGCATAGTTCTGATGATAAAACACTTCTGCAGTTTGTAACTAATGTGGTGTCTATGGACAGTTCTAACAGTCACATTGTTTCTTCTGAGGGAGAAATGGAACAAAGTTCTAACCCAGACCCTCCAACTCCACCTGTTGAATGTGCTGTTCCTGGACCTGGACATGATTCTATCTCTTCTCATGAAAACCCGACTAAACCTCCAAGTCAATTAATGTCAGAGACTAGTTCTGAATTTAAAACACTTCAGCAGTCTATAAGTAATGTGGAAGGGGAACAAGGACATCTGCCTATCTCATTCATGTCTCCACCAAACATGGAAAGTATGGAGCCTAATCAGAGTTTCCTGCCCTTTGAGGGGGGAATGGAGATGTCCTTGGATACGTCTGATCATACATCAGATCTTGAGAGTGAAAGGACAAATGGAAAACCAAAGAATAAACTTCCTCGTCCTCGTAATCCTCTAATTGATGCTGTTGCTGCTCATGACAAAAGCAAGCTTAGGAAGGTTACTGAACGGGTTATGCCTCAAATTGCACCAAAGGTAGATGAAAGAGATTCTTTACTAGAACAGATAAGAACAAAGTCCTTCAACTTGAAGCCTGCTGTGACTACACGACCTAGCATTCAAGGTCCAAAAACAAATTTGAAGTTTGCTGCCATCTTGGAGAAAGCAAATGCAATTCGCCAGGCTTTGGCTGGAAGTGATGAAGATGATGATGCAGATTGGAGCGATTCTTGA 5085 0.4134 MPLSKYRVRNEYSLADPELYRAADKDDPEALLEAVAMAGLVGLLRQLGDLAEFAAEIFHDLHEEVMATAARGHGLMARVKQLEAEVPSLEKAFFSQTHHSSFYTNGGIDWHPNLRFEQNLVTRGDLPRFIMDSYEECRGPPRLFLLDKFDVAGAGACLKRYTDPSFFKMESTSSVTATIEVQREKRIRKVKLKKGARLRDGETPNAVPSHAKLHQLLLEERIENGYSNPARRVKLKKRQLNGPAVETRDGKSYMEKFLETPSPDHKMVCETSIFPLPVKQTPYDTSEAGIKILEISSISPVKKSLGNKNTYSSPDENELELKPFSEMDGGTNEDLVKVKEQISDGVTDKKSSNHLKLPDAAELAINEQKKIEGSLDGHHSDDVTSEVDNYMDALTTMESELETDNEYKPKNSFLNIQKAANTNDKEEHQLQAQFSDSQSFGDSSMSDDSSSFNQDRNEEHIKVEAQSSDSQSTGTSSTLDDNSSFRRDGNGQHREPQAHFSDSQSVGSSSTSDENFKKDKSYLPHSDSLTTAVENIQSEPILFTNAKCCELKVEDAPSNQLPQNVEFQHTDCERFVMHDDAPVHEEEISSDLGQASSDLMTSGQVLCSNLGSTLPVILPAATQSDETPSAPAELNLRLDDDNADRTGLVESISSKPVSLSLTDDAHPVGSSAKTSLDNLDDDDPYIHCDDLLQVLNDLELAHGDECSDHSEIKMSQAEPPKENPSKILVNRDIGSPVEDPVSPSMEELNLNSGATLAHDCQDSKDEDCTVTTQLNSETPVSPLSCFTGGLLSDSTHNNTQDEPGSAEIEVSSSDLQSKVGEIPKMVHDDEINGSTFSVNPVEDDGHFKRSSPDNHVMVNDLVTENVQSDDQAVYSAPSVDSAENDEGVVSCPASSQICSPSRGLSDLEEPPLSSHSYPMEIKSNEVELTQIAMVTNAEKSENQSAPLLDVASSDVVNSSLSNITKLEESLSTFADSQKKEIEVDEAVARDSLTELEEQKIVDQPEIASVDVQLNLNKLVPFDLPDSEICNNIQKSSPREKFQHGAFVDDAEMVPKFLGLDAQQSESLSYGLHDPLQNDRDGFSSPSGNQLEPETDLDLFSKSQIGEQDAEFPLREEKNFASEKPQFQQMQKYQLEQESTNATSDCVSEIHADEPSSFYSLPQSSSQENNAAKRVMDPLKPLLPNLFPKATENKLDEMPPMPPLPPMQWRMGKVQHASLASQREELEVSQVSVQPNRPDKQSLFGLPTSERETLYQNPFLPVMALESDKLQHSSGFAVGVSGHPVAIPFQFPIMVNESKGQYNYLLLDSNQIQNPLLTLPVASMGMPPQGFIVAPEGEVIQNSNPCAPIPSAAYAVLGHNSIPPQEKSTQPPHQLMMETTPDDKSLQQSMSNMVSMDRPPHGHAVASEGEMELNSNPGPTIPPAECAVSGHDSLSPQEKLTQPPSQLLMEHSSDDKTLLQFVTNVVSMDSSNSHIVSSEGEMEQSSNPDPPTPPVECAVPGPGHDSISSHENPTKPPSQLMSETSSEFKTLQQSISNVEGEQGHLPISFMSPPNMESMEPNQSFLPFEGGMEMSLDTSDHTSDLESERTNGKPKNKLPRPRNPLIDAVAAHDKSKLRKVTERVMPQIAPKVDERDSLLEQIRTKSFNLKPAVTTRPSIQGPKTNLKFAAILEKANAIRQALAGSDEDDDADWSDS 1694
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma01g01318 1694 Coils Coil 978 998 - -
Gma01g01318 1694 Gene3D - 1603 1693 - -
Gma01g01318 1694 Gene3D - 103 219 - -
Gma01g01318 1694 MobiDBLite consensus disorder prediction 1471 1602 - -
Gma01g01318 1694 Gene3D - 1 90 - -
Gma01g01318 1694 MobiDBLite consensus disorder prediction 423 524 - -
Gma01g01318 1694 MobiDBLite consensus disorder prediction 466 485 - -
Gma01g01318 1694 PANTHER WASP-1 1 520 IPR028288 GO:0005856|GO:0030036
Gma01g01318 1694 PANTHER WASP-1 551 1379 IPR028288 GO:0005856|GO:0030036
Gma01g01318 1694 PANTHER WASP-1 1392 1694 IPR028288 GO:0005856|GO:0030036
Gma01g01318 1694 MobiDBLite consensus disorder prediction 707 737 - -
Gma01g01318 1694 MobiDBLite consensus disorder prediction 1070 1095 - -
Gma01g01318 1694 ProSiteProfiles WH2 domain profile. 1632 1650 IPR003124 GO:0003779
Gma01g01318 1694 MobiDBLite consensus disorder prediction 303 331 - -
Gma01g01318 1694 MobiDBLite consensus disorder prediction 1079 1095 - -
Gma01g01318 1694 MobiDBLite consensus disorder prediction 1471 1485 - -
Gma01g01318 1694 MobiDBLite consensus disorder prediction 496 512 - -
Gma01g01318 1694 PANTHER WH2 DOMAIN, SCAR/WAVE FAMILY PROTEIN-RELATED 551 1379 - -
Gma01g01318 1694 PANTHER WH2 DOMAIN, SCAR/WAVE FAMILY PROTEIN-RELATED 1 520 - -
Gma01g01318 1694 PANTHER WH2 DOMAIN, SCAR/WAVE FAMILY PROTEIN-RELATED 1392 1694 - -
Gma01g01318 1694 MobiDBLite consensus disorder prediction 1506 1540 - -
Gma01g01318 1694 MobiDBLite consensus disorder prediction 831 853 - -
Gma01g01318 1694 MobiDBLite consensus disorder prediction 792 815 - -
Gma01g01318 1694 MobiDBLite consensus disorder prediction 1407 1441 - -
Gma01g01318 1694 MobiDBLite consensus disorder prediction 432 451 - -
Gma01g01318 1694 MobiDBLite consensus disorder prediction 1577 1593 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma01g01318 Gma-Chr1 46301303 46308867 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma01g01318 - - gmx:100814240 3271.87
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma01g01318 01 46301303 46308867 Gma01g01318 01 46301303 46308867 ECH
Gma18g01930 18 52353674 52360427 Gma01g01318 01 46301303 46308867 PCT
Gma09g02554 09 50858584 50865779 Gma01g01318 01 46301303 46308867 PCT
Gma01g01318 01 46301303 46308867 Gma18g01930 18 52353674 52360427 PCT
Gma01g01318 01 46301303 46308867 Gma09g02554 09 50858584 50865779 PCT