Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma01g01317 ATGGAGAGTTCCGTTGGGGGAGAGAGGAGTGAACGCGTGGCACTTTCAGAGGTGGTGGCAGATTGTGTGAAGCGGTGGTTCAGAGATGCACTGAAAGAGGCTAAGGCAGGGGACATAAACATGCAAGTGTTGGTGGGTCAGATGTACTACGGTGGTTATGGGGTTCCAAGAGATGCTCAGAAGGGAAGAGTTTGGCTGACCAAAGCATCAAGGACTAGGTCTTCGGTTTGGAAAGTAGGTGATAAGCACCCAGGTTATAATGCAAGTGACTCTGATTCGGATGAATTGAAGGAGGATTCATAA 303 0.4884 MESSVGGERSERVALSEVVADCVKRWFRDALKEAKAGDINMQVLVGQMYYGGYGVPRDAQKGRVWLTKASRTRSSVWKVGDKHPGYNASDSDSDELKEDS 100
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma01g01317 100 PANTHER TETRATRICOPEPTIDE-LIKE HELICAL DOMAIN-CONTAINING PROTEIN-RELATED 1 100 - -
Gma01g01317 100 Gene3D Tetratricopeptide repeat domain 8 86 IPR011990 GO:0005515
Gma01g01317 100 PANTHER EXPRESSED PROTEIN 1 100 - -
Gma01g01317 100 SMART sel1 39 74 IPR006597 -
Gma01g01317 100 SUPERFAMILY HCP-like 27 70 - -
Gma01g01317 100 MobiDBLite consensus disorder prediction 78 100 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma01g01317 Gma-Chr1 46286798 46291479 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma01g01317 - - gmx:100527831 183.341
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma01g01317 01 46286798 46291479 Gma01g01317 01 46286798 46291479 ECH
Gma09g02555 09 50866745 50870472 Gma01g01317 01 46286798 46291479 PCT
Gma01g01317 01 46286798 46291479 Gma09g02555 09 50866745 50870472 PCT