Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma01g01316 ATGTGGGAATTCTCTGTTGGTTTATATATGATCAACATTTGGCCAGACTCTTTGCTCTATGCAGCAATATATGGTACCATTGAATCTGCCTCCACTGCACTGTTTGATCCCATAATTGGAAGATGGGTTGATAAGTTGTCTTATGTGAAGGTTTTGAAGTTGTGGTTGGTGACACAAAATCTCTCTTTTGTTATTGCCGGGGCCACTGTAATTGCTTACTTGTCAACTCAGTCTTTGAAGTTTACAAATTTCCCAGCTTTCATATTGCTGGTAAACCCCCCAGAATTGCTGACAAAGATGAATTCAGTTACAAGACGCATTGATCTAACTTGCAAGCTTCTTGCTCCTGTTGTTACTGGGTTTATAATAAGCTTTGTATCGCTAAAAGCATCTGCTCTAACTTTAGCACTGTGGAATACTGTGTCTGTTTGGGTGGAGTATTGGCTTTTCACATCTGTATATAAAGGGATTCCAGCTTTGGGCCTAAGTAGCCAGAGGAGGATGGAAAGACCTTCACAAATTTATTTAAAAGAAGAAGTTGCCCTTCCTGGACTAGCTCTGGCTTTGCTATTTTTCACTGAATACCTGCATGTTATTGGAATAGCAAGAGGAATAAGTGCCGGAATTGAAATTGCTGCAACAGTTGTATATCCTGTGCTACAGTCTCAAATATCAACTATTAGAACTGGACTTTGGTCTATATGGTCACAGCTGGAATATGGCCAAAGTGGCTTTCTTTCATCATATATTCTGATGGGAAGTGTAGCCATATATCGGCTTGGATTGTGGATGTTTGATTTGTCCGATCTTGTTCCTGAATCTGATCGTTTGATTGTTGGGGGTGTACAGAACTCACTTCAATCTTTGATGGATTTATTGGCCTATGTTATGGGAATCATAATATCTAATCCGCGGGTGA 919 0.3993 MWEFSVGLYMINIWPDSLLYAAIYGTIESASTALFDPIIGRWVDKLSYVKVLKLWLVTQNLSFVIAGATVIAYLSTQSLKFTNFPAFILLVNPPELLTKMNSVTRRIDLTCKLLAPVVTGFIISFVSLKASALTLALWNTVSVWVEYWLFTSVYKGIPALGLSSQRRMERPSQIYLKEEVALPGLALALLFFTEYLHVIGIARGISAGIEIAATVVYPVLQSQISTIRTGLWSIWSQLEYGQSGFLSSYILMGSVAIYRLGLWMFDLSDLVPESDRLIVGGVQNSLQSLMDLLAYVMGIIISNPRV 306
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma01g01316 306 PANTHER SOLUTE CARRIER FAMILY 40 MEMBER 1 92 168 - -
Gma01g01316 306 PANTHER SOLUTE CARRIER FAMILY 40 MEMBER 1 173 305 - -
Gma01g01316 306 PANTHER SOLUTE CARRIER FAMILY 40 MEMBER 2 91 IPR009716 GO:0005381|GO:0016021|GO:0034755
Gma01g01316 306 PANTHER SOLUTE CARRIER FAMILY 40 MEMBER 92 168 IPR009716 GO:0005381|GO:0016021|GO:0034755
Gma01g01316 306 SUPERFAMILY MFS general substrate transporter 6 301 IPR036259 -
Gma01g01316 306 Pfam Ferroportin1 (FPN1) 1 90 IPR009716 GO:0005381|GO:0016021|GO:0034755
Gma01g01316 306 Pfam Ferroportin1 (FPN1) 93 170 IPR009716 GO:0005381|GO:0016021|GO:0034755
Gma01g01316 306 Pfam Ferroportin1 (FPN1) 198 305 IPR009716 GO:0005381|GO:0016021|GO:0034755
Gma01g01316 306 PANTHER SOLUTE CARRIER FAMILY 40 MEMBER 173 305 IPR009716 GO:0005381|GO:0016021|GO:0034755
Gma01g01316 306 PANTHER SOLUTE CARRIER FAMILY 40 MEMBER 1 2 91 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma01g01316 Gma-Chr1 46277475 46280843 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma01g01316 2 305 Organic Solute Cotransporters AT2G38460 46.154 4.95e-112 332
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma01g01316 K14685 - gmx:100802561 432.95
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma01g01316 01 46277475 46280843 Gma01g01316 01 46277475 46280843 ECH