Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma01g01315 ATGGAAGAAAACGTGAAATTGAAGGAGTCTCCGTTCACTGGACAACAAGAAAAGCCATCTGCACTAATCACTTATTTGTACATTGGCCACTTCTTAGCAAGATGGGGTGCCAGAATGTGGGAATTCTCTGTTGGCTTATACATGATCAATATTTGGCCAGAATCGTTGCTGTACGCAGCAATATATGGTGCAGTTGAATCTGCCGCTATTGCTGTGTTTGGTCCCATAATTGGAAGATGGGTTGATAAGTTGTCTTGTGTGAGGGTTTTGAAATTGTGGTTGGTGACACAAAATCTCTCTTTTGTTATTGCTGGGGGCTCCGTAGTTGCCTTACTTGTCCACTCTTCTTTGAAGTCTACAAATTTCTCCATTTTCATCTTGCTGGTGATCATAATCAATGTCTGTGGCGGCATTGGTGTGCTTTCAACTCTTGCTGGTACAATATTGATTGAAAGAGAATGGTTGTTAGTTATATCTGAAGATCAACCCCCAGAATTGCTTACAAAAATGAATTCGGTTACGAGACGCATTGATCTAAGCTGCAAGCTGCTTGTTCCTGTCATTTCTGGTTTCATAATAAGCTTTGTATCACTGAAAGCATCTGCTATAACCTTAGCACTGTGGACTACTGTCTCTGTTTGGGTGGAGTATTGGCTTTTCACATCTGTATATCATGGAATTCCAGCTTTGGTGCAAAGTAGCCAAAGGAGAATGGAAAGGCTTATACAATGTGATATGGAAATGAACAATCAAACTATGGAGAAAGATAGCTTGCTTCCTGTTACTGATGATGGCTCAGAATTGGCAGATAGAAAAGCCAGAAAAAAAATTTCTGAGAGGATTTTAGAGATTCCCTATATTGCTGCATGGAGAGTTTATTTACAACAAGAAGTTGTCCTTCCTGGACTGGCTCTGGCTTTGCTATTTTTTACTGTACTCAGCTTTGGAACTTTAATGACAGCTACCTTAGAATGGGAAGGAATACCTGAATATATTATTGGAATATCAAGAGGAATAAGTGCTGTGATTGGAATAGCTGCAACAGTTGTATACCCTGTGCTACAGTCTCGTATATCGACCATTAGAACTGGACTTTGGTCTATATGGTCTCAGTGGAGTTTCCTCCTTCCATGTGTGGCTGCAATATGGATCCAAAATGGCTTTCTATCATCATATATTTTGATGGGAAGTGTAGCCATATCGCGGCTTGGATTGTGGATGTTTGACTTATCTGTACTTCAACAAATGCAGGCAAGAAATAGCCCTTATTGTCTGAAATTAGATCTTGTTTCTGAATCCGATCGTTTGATTGTTGGAGGTGTTCAAAATTCGCTTCAGTCTTTGATGGATTTATTGGCCTATGTTATGGGAATCATAATATCTGATCCACGGGACTTCTGGAAGTTGACTACAATATCTTTTCTAGCAGTCACATTAGCTGCATTCCTCTACTGTATCCACACATACCATGCACGAAAGCACCTCTTCCACTTTGACCAAGTATTGTGGGGTAAATGTTTTGTAAGAGCATCTTAA 1536 0.3997 MEENVKLKESPFTGQQEKPSALITYLYIGHFLARWGARMWEFSVGLYMINIWPESLLYAAIYGAVESAAIAVFGPIIGRWVDKLSCVRVLKLWLVTQNLSFVIAGGSVVALLVHSSLKSTNFSIFILLVIIINVCGGIGVLSTLAGTILIEREWLLVISEDQPPELLTKMNSVTRRIDLSCKLLVPVISGFIISFVSLKASAITLALWTTVSVWVEYWLFTSVYHGIPALVQSSQRRMERLIQCDMEMNNQTMEKDSLLPVTDDGSELADRKARKKISERILEIPYIAAWRVYLQQEVVLPGLALALLFFTVLSFGTLMTATLEWEGIPEYIIGISRGISAVIGIAATVVYPVLQSRISTIRTGLWSIWSQWSFLLPCVAAIWIQNGFLSSYILMGSVAISRLGLWMFDLSVLQQMQARNSPYCLKLDLVSESDRLIVGGVQNSLQSLMDLLAYVMGIIISDPRDFWKLTTISFLAVTLAAFLYCIHTYHARKHLFHFDQVLWGKCFVRAS 511
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma01g01315 511 PANTHER SOLUTE CARRIER FAMILY 40 MEMBER 21 508 IPR009716 GO:0005381|GO:0016021|GO:0034755
Gma01g01315 511 Gene3D MFS general substrate transporter like domains 17 488 IPR036259 -
Gma01g01315 511 Pfam Ferroportin1 (FPN1) 23 477 IPR009716 GO:0005381|GO:0016021|GO:0034755
Gma01g01315 511 CDD MFS_SLC40A1_like 25 487 IPR009716 GO:0005381|GO:0016021|GO:0034755
Gma01g01315 511 PANTHER SOLUTE CARRIER FAMILY 40 MEMBER 1 21 508 - -
Gma01g01315 511 SUPERFAMILY MFS general substrate transporter 23 493 IPR036259 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma01g01315 Gma-Chr1 46252031 46256126 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma01g01315 16 509 Organic Solute Cotransporters AT2G38460 59.281 0.0 598
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma01g01315 K14685 - gmx:100813172 971.459
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma01g01315 01 46252031 46256126 Gma01g01315 01 46252031 46256126 ECH