Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma01g01312 ATGGAAGACCAGAAAGAGAAGATTTCAGTTTCGGAAAATTTAGAAATGAACATTGACGTGCAGCCAGAGCTGTTTGTGGACAAACATGAGCCGGAAACGGGTGGCGACACCACCGGCATCCTACGGCGGTGGAAGAGGAAAGAAATGCTAAGGAGAGGCTCTTTAGGGCTAAGAGGAATTGCTCTATTTATGTCTTTGATTTCACTCATTCTTACGGCTAGTAACAAGCATGGTTATTGGAATTTTGACAAGTTCGAAGAATACAGATACATGCTGGCTGTGGCAGCTCTATCTAGTTTGTACACTGTGGTTCAAGTGTTTCGTCAAGTTCATGAACTTTTCACGGGGAAAAGCCTGATGCGGCCAAAAACTGAAGGGTTGATTGATTTTGTTGGGGATCAGGTTGTGGCATATCTCTTGATATCATCAACGTCTTCAGCGATTCCACCAACAGATAGAATGAGGGAAGTTACCACCAATATATTTACGGACTCTGCAGCTGCAGGCATTGCCTTTTCCTTTTTTGCATTTTGCTGTCTAGCACTGTCAGCTGTTATATCAGGATACAAACTCTCTACCCAAACTTATACTCCTATGAACATCCTTGATAGTTAA 615 0.4276 MEDQKEKISVSENLEMNIDVQPELFVDKHEPETGGDTTGILRRWKRKEMLRRGSLGLRGIALFMSLISLILTASNKHGYWNFDKFEEYRYMLAVAALSSLYTVVQVFRQVHELFTGKSLMRPKTEGLIDFVGDQVVAYLLISSTSSAIPPTDRMREVTTNIFTDSAAAGIAFSFFAFCCLALSAVISGYKLSTQTYTPMNILDS 204
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma01g01312 204 Pfam Casparian strip membrane protein domain 50 179 IPR006702 -
Gma01g01312 204 PANTHER CASP-LIKE PROTEIN 4B1 30 196 - -
Gma01g01312 204 PANTHER NITRATE, FORMATE, IRON DEHYDROGENASE 30 196 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma01g01312 Gma-Chr1 46173580 46175694 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma01g01312 34 147 Miscellaneous Gene Families AT1G79780 25.600 5.69e-07 46.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma01g01312 - - gsj:114416637 391.349
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma01g01312 01 46173580 46175694 Gma01g01312 01 46173580 46175694 ECH
Gma18g01926 18 52322551 52325185 Gma01g01312 01 46173580 46175694 PCT
Gma09g02559 09 50884864 50887196 Gma01g01312 01 46173580 46175694 PCT
Gma01g01312 01 46173580 46175694 Gma18g01926 18 52322551 52325185 PCT
Gma01g01312 01 46173580 46175694 Gma09g02559 09 50884864 50887196 PCT