Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma01g01294 ATGAGGTCTGTTAGGAGAACACAAACCTTTAACATCAATCGGACTATACCTTTCTCTTCAAATCCAGCGATCAACTGTGTAGGCAGAAATTTGGAGAAGTATCAACTTGGTGGGGTCATATTTGGTTGCAAGAATAGTACTTTAAAAGAATGTCAATCAAAACAACTCTTTGGCTTACCAACAAACCACTTTTCCTATGTGAAGAATATTGATCCTGGTCTGCCTATATTCTTATTCAACTATAGTGACAGGAAGCTCCATGGAATTTTTGAGGCATCTAGCAAGGGGAAAATGTACATAGACCCTTATGCATGGATTGATGATAATTCAGATTTGGATAGAACACAGTATCCTGCACAGGTGAAAGTTCGTGTTCGACTTCAATGCAAGCCACTGTCTGAAGATCAATTTTCACGAGTAATTGCAGAAAACTATTACAAGAATAATCATTTCTGGTTCGAATTAGACCACAGACAAGCAAACAAGCTTACTTCATTGCTGGCTTCTTTTGCATTTGCCTCTGGTTGTCATTTGAGGCAAAAAACTATATCTCAATCTCTTTCATCAACTCTGAAAGAAGGTGAAGCATTCGAAACACATGAATCAGAGACAAAGTCTTTAACTAGCTTAAGTAAGACAACAATTGCCACTGAAATTACTTCTTTAGATGGAGATATCAAGTCATTGGATGTGGTGAGGGTGGAGACTGAGGAGATGAACATTATATATGAGAAACTAAAGGAATGGGCTCACGAAAGTCAAGATCTCCCTATTTCAGACCATCTGGATGACACTGAAGATGAGACTGAGATGTTCACTCTGGAAAAGCATGAGAATGATGAGAATGAGATGGACATTGAGGAATTAATGGAATTGACCCTTGTCCATGAAAACCCAGACATCTCTGTGTCAGACCATACAAATGACACTCCACATGAGAATGATATATGCACCATAAGAAATGATTATGGAGAGGTGCCAACAGGTTCAGAGGAAAAGGAGAAGAGTTCAAGTCCTCTAATTGATCATCAAAACACCATCATCTTTGACGAGTTGATGCAAGAAGTTGAAGAACTAAAAACTTTCAAGAAAATACAAACCCAGACAAATTGTTACCTAGACGATATGCTGAGGGAAGCAGAATTGAAAATTCAACATCTAATAGATCGTTGTACAATGTTAGAATTAGCATTTAATCTTCCTCCGCCACATGCTGAGAAGACAAGCATTACATCATATGCTGAGCAGCGTGTAGACCCTACAGAGACGTCATTTTTAAAAGGGAATTTTAATGAAGAAGCATGGTTATCAACTATAGATTTGTATTGTCCTGCCGAACGTGTGATAACTCTTTATCCTGTGAACTCAGCTCACTCATGTGCTTCAATGGTACAACTAAATGGTAAGCTTGATATTTTTGGTGGTAGAGATGTTGGATCTTATAGTCCAATTTTCGACAAGCGGACCTTGTGCCCCTCTTTGAATCAAAGCAAAGGAAACTTGGCAGTGCTGTCTTTGAACGATCAAATGTTTGCCGTAGATTGTGCCAATGGAATTGACAGCTTTTCTGATATTGAGGTGTTTGATTTAGACAACGGAAGGTGGATCTCTGCACATTCACATTCCATGATAGACAAGGCATTTGCCATTGCTGCTGCGGAATTCAACAATTGGTTTCATACTACTTTTGGAAATGGAATTAACTACTTGAAGTTTTTTCTTGGTGGCTTCGATGGAAACAAAAAGGTTCCAAGTATTAAGCTCTCTAAGTCAATAAAGGAGTATGAAAACAAGGATGCATGA 1803 0.3844 MRSVRRTQTFNINRTIPFSSNPAINCVGRNLEKYQLGGVIFGCKNSTLKECQSKQLFGLPTNHFSYVKNIDPGLPIFLFNYSDRKLHGIFEASSKGKMYIDPYAWIDDNSDLDRTQYPAQVKVRVRLQCKPLSEDQFSRVIAENYYKNNHFWFELDHRQANKLTSLLASFAFASGCHLRQKTISQSLSSTLKEGEAFETHESETKSLTSLSKTTIATEITSLDGDIKSLDVVRVETEEMNIIYEKLKEWAHESQDLPISDHLDDTEDETEMFTLEKHENDENEMDIEELMELTLVHENPDISVSDHTNDTPHENDICTIRNDYGEVPTGSEEKEKSSSPLIDHQNTIIFDELMQEVEELKTFKKIQTQTNCYLDDMLREAELKIQHLIDRCTMLELAFNLPPPHAEKTSITSYAEQRVDPTETSFLKGNFNEEAWLSTIDLYCPAERVITLYPVNSAHSCASMVQLNGKLDIFGGRDVGSYSPIFDKRTLCPSLNQSKGNLAVLSLNDQMFAVDCANGIDSFSDIEVFDLDNGRWISAHSHSMIDKAFAIAAAEFNNWFHTTFGNGINYLKFFLGGFDGNKKVPSIKLSKSIKEYENKDA 600
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma01g01294 600 Coils Coil 377 397 - -
Gma01g01294 600 Pfam Development and cell death domain 37 166 IPR013989 -
Gma01g01294 600 Gene3D - 412 594 IPR015915 GO:0005515
Gma01g01294 600 PANTHER - 25 571 IPR044832 GO:0034976
Gma01g01294 600 PANTHER INFLUENZA VIRUS NS1A-BINDING PROTEIN 25 571 - -
Gma01g01294 600 SMART dcd 34 169 IPR013989 -
Gma01g01294 600 ProSiteProfiles DCD domain profile. 34 169 IPR013989 -
Gma01g01294 600 SUPERFAMILY Kelch motif 436 564 IPR015915 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma01g01294 Gma-Chr1 45685708 45690259 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma01g01294 - - gmx:102660492 1106.66
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma01g01294 01 45685708 45690259 Gma01g01294 01 45685708 45690259 ECH
Gma07g01459 07 19666649 19668834 Gma01g01294 01 45685708 45690259 PCT
Gma01g01294 01 45685708 45690259 Gma07g01459 07 19666649 19668834 PCT