Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma01g01275 ATGTCTGATCAATTGGCTTGTGAGAAGTTTGGAAGGAAGGATCTAAGCTACCAGAATTGGAGGTGGAAGCCCCACCAATGTGACTTACCCAGGTTCAATGCCACAGCATTGCTTGAAAGGCTAAGGAACAAGAGGATGGATGTTGAATCTTCTGTGCCCCCAACTCTCAAATCTATTCGGACTGTTGCAAATGGTTCACTCAACATTTTCAAGGCCGAAGAAAACAATGCAACAATTGAGTTCTATTGGGCCCCATTGCTGGTAGAATCAAACTCGGATGACCCTCTGAACCATAGGGTAGCAGAACGAACTGTGAGAGTGCAGGCCATAGAGAAGCATGCTAGGCGCGCAATGAATGTGCTGTGGGGTTCATTTGGAGACCCAAATGGGGTAAACAAAAGGGTAGGAATGGTGCGAGTCTATGAAATGGCCTTGAGGACCTGGTTTGACTGGTTGGAAGTCCATATTAATCGTAACAAAACCAAGCTGTTTTTCGTTTCTATGTCACCAACTCACCAAAAGGCTCATGAATGGGGAGGAGTTAAGGGTGACAATTGTTACAAAGAAACAGATCAAATTACAGAAGAAGGGTATTGGGGGAATGGTTCAATTCCAAGTATGATGCGAGTTGTGGAAAATGTGATTGAGGATTTGAATGGAAGAGGTTTGAATGTTCAATTGCTTAACATCACACAGCTCTCAGAGTATAGGAAAGAAGGACACCCATCTATCTATAGAAAGCAATGGGAGCCTCTAACTGAAGAACAGTTATCAAATCCAAAAACTAATGCTGATTGCATACATTGGTGCCTAACTGGTGCGCCTGATGCGTGGAATGAGCTCCTCTATGCCTATATTTCCATCGATGACTAA 873 0.4364 MSDQLACEKFGRKDLSYQNWRWKPHQCDLPRFNATALLERLRNKRMDVESSVPPTLKSIRTVANGSLNIFKAEENNATIEFYWAPLLVESNSDDPLNHRVAERTVRVQAIEKHARRAMNVLWGSFGDPNGVNKRVGMVRVYEMALRTWFDWLEVHINRNKTKLFFVSMSPTHQKAHEWGGVKGDNCYKETDQITEEGYWGNGSIPSMMRVVENVIEDLNGRGLNVQLLNITQLSEYRKEGHPSIYRKQWEPLTEEQLSNPKTNADCIHWCLTGAPDAWNELLYAYISIDD 290
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma01g01275 290 Pfam GDSL/SGNH-like Acyl-Esterase family found in Pmr5 and Cas1p 118 284 IPR026057 GO:0016740
Gma01g01275 290 Pfam GDSL/SGNH-like Acyl-Esterase family found in Pmr5 and Cas1p 50 116 IPR026057 GO:0016740
Gma01g01275 290 PANTHER PROTEIN TRICHOME BIREFRINGENCE-LIKE 9-RELATED 1 288 IPR029962 GO:0016413
Gma01g01275 290 PANTHER PMR5/CAS1P GDSL/SGNH-LIKE ACYL-ESTERASE FAMILY PROTEIN 1 288 - -
Gma01g01275 290 Pfam PMR5 N terminal Domain 2 28 IPR025846 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma01g01275 Gma-Chr1 45199400 45203107 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma01g01275 - - gmx:100789678 550.436
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma01g01275 01 45199400 45203107 Gma01g01275 01 45199400 45203107 ECH
Gma18g01900 18 51989661 51994334 Gma01g01275 01 45199400 45203107 PCT
Gma07g01444 07 19489953 19494079 Gma01g01275 01 45199400 45203107 PCT