Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma01g01272 ATGGATCAGATATTCAACAAGGTCGGATCCTATTGGTTCAACCAGAAAGCCTCCAGCCAGCTCAATTCCGTTGGTGATGACATCAATTCGATGACAAACAGTATTGAAGGGGGAACCAAATGGTTGGTCAACAAAATAAAAGgaaagATGCAAAAGGCATTGCCAGAGTTGCTAAAGGAGTACGATCTACCAATAGGAATCTTTCCTCGTGATGCAACAAACTATGAATTCAATGAAGAAACAGGAAAGCTTGTTGTTTACATTCCTCAAGTATGTGAAGTTGGCTACAAGGATTCATCAGTCTTGCGTTTCTTCACCACCGTGACTGGTTATCTGGAGAAAGGAAAGTTAGCAGACATAGAAGGAATGAAGACAAAAGTATTGATCTGGGTGAAAGTAACAACCATTTTGTCAGAGGGATCGAAGCTCTATGTGACAGCTGGCATGAAGAAAACAAGGAGTAGGGAAGCGTACGAGGTTACAAGAGATGGTGTATGCATAGATAAGTTCTAA 513 0.4074 MDQIFNKVGSYWFNQKASSQLNSVGDDINSMTNSIEGGTKWLVNKIKGKMQKALPELLKEYDLPIGIFPRDATNYEFNEETGKLVVYIPQVCEVGYKDSSVLRFFTTVTGYLEKGKLADIEGMKTKVLIWVKVTTILSEGSKLYVTAGMKKTRSREAYEVTRDGVCIDKF 170
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma01g01272 170 PANTHER T31J12.3 PROTEIN-RELATED 3 170 IPR007493 -
Gma01g01272 170 Pfam Protein of unknown function, DUF538 56 159 IPR007493 -
Gma01g01272 170 Gene3D - 32 170 IPR036758 -
Gma01g01272 170 SUPERFAMILY At5g01610-like 2 169 IPR036758 -
Gma01g01272 170 PANTHER DUF538 FAMILY PROTEIN 3 170 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma01g01272 Gma-Chr1 45114919 45121356 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma01g01272 - - gmx:100500143 344.354
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma01g01272 01 45114919 45121356 Gma01g01272 01 45114919 45121356 ECH
Gma07g01442 07 19444589 19448325 Gma01g01272 01 45114919 45121356 PCT
Gma01g01272 01 45114919 45121356 Gma07g01442 07 19444589 19448325 PCT