Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma01g01271 ATGGCCCTTTCTTGCTCCAAAGTTTTAAGCTTTTATCTCTCGCCCGTTGTGGGTGGTGGTGATGTTCCGAAAAAGCTCACTTTTTCTTCTTTTTTGGGTCTTTCTAAGGGTGTTGGTGGAAGCAGGAGCTCGAGGGTGTGTGCTGCTTCAAATGCACCCGCACCACTCGCTGGGGTCATATTTGAACCATTTCAAGAGCTCAAGAAGGATTATCTTGCTGTTCCGATTGCACACAATGTTTCCTTGGCTCGTCAGAACTATGCAGATGACTCTGAATCTGCAATCAACGAGCAGATCAATGTGGAATACAACGTTTCCTATGTGTACCACGCCTTGTTTGCGTACTTCGACAGAGACAACATAGCTCTCAAAGGACTTGCAAAGTTCTTCAAGGAATCAAGTGAAGAAGAAAGAGAGCATGCCGAGCAGCTTATAAAGTATCAGAACATTCGTGGTGGACGAGTGGTGCTGCACCCAATCACAAGTCCTCCCTCGGAATTTGAGCATTCGGAAAAAGGGGATGCCTTGTATGCCATGGAACTAGCTTTGTCTTTGGAGAAGTTGACGAATGAGAAACTTCTGCACGTTCACAGTGTGGCAGAACGTAACAATGATCCTCAATTGGCAGACTTCATTGAGAGCGAGTTCTTGTATGAGCAGGTTAAATCGATTAAAAAGATTGCAGAGTATGTGGCTCAACTGAGATTAGTTGGAAAGGGTCATGGTGTGTGGCACTTTGATCAAAAGCTTCTTCACGATGAAGATCATGTATAA 774 0.447 MALSCSKVLSFYLSPVVGGGDVPKKLTFSSFLGLSKGVGGSRSSRVCAASNAPAPLAGVIFEPFQELKKDYLAVPIAHNVSLARQNYADDSESAINEQINVEYNVSYVYHALFAYFDRDNIALKGLAKFFKESSEEEREHAEQLIKYQNIRGGRVVLHPITSPPSEFEHSEKGDALYAMELALSLEKLTNEKLLHVHSVAERNNDPQLADFIESEFLYEQVKSIKKIAEYVAQLRLVGKGHGVWHFDQKLLHDEDHV 257
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma01g01271 257 Pfam Ferritin-like domain 93 236 IPR008331 GO:0008199
Gma01g01271 257 ProSitePatterns Ferritin iron-binding regions signature 2. 205 225 IPR014034 -
Gma01g01271 257 Gene3D - 54 255 IPR012347 -
Gma01g01271 257 SUPERFAMILY Ferritin-like 76 252 IPR009078 -
Gma01g01271 257 ProSiteProfiles Ferritin-like diiron domain profile. 85 238 IPR009040 -
Gma01g01271 257 PANTHER FERRITIN 1 256 IPR001519 GO:0006826|GO:0006879|GO:0008199
Gma01g01271 257 CDD Euk_Ferritin 89 248 - -
Gma01g01271 257 PANTHER FERRITIN-2, CHLOROPLASTIC 1 256 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma01g01271 Gma-Chr1 45096583 45100093 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma01g01271 K00522 - gmx:547988 485.337
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma01g01271 01 45096583 45100093 Gma01g01271 01 45096583 45100093 ECH
Gma18g01898 18 51951447 51954422 Gma01g01271 01 45096583 45100093 PCT
Gma07g01440 07 19426331 19429237 Gma01g01271 01 45096583 45100093 PCT
Gma01g01271 01 45096583 45100093 Gma18g01898 18 51951447 51954422 PCT
Gma01g01271 01 45096583 45100093 Gma07g01440 07 19426331 19429237 PCT