Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma01g01268 ATGGCTTCCATCAACTTCAACCCCTTCGGTGGAAACTGGTTCTCAAAACCCCCTAATCCCCTCCCTCTCCCTTCCCTCCCCAACACCCTCACCGACGCACCCTCCCTCCCTCCCAACTTCGCCGCAATCTCCCTCCCAAACCCCTTCCGCCGCAGGCCCAAGCCCAAGTCCGCCGAGCCCACCGAACCCGGGCCCTACGAGCAGCTGGCCCGGCAGGTCCTCTGGGAGTGCGAGACCCTCCCGGACCACCGCCACACCCCGGAGGTCGATAAGATCCTCGCCGACAATGACGCCGCCTTCGGCGGCGACGACGACTCCGTTTTCGTCCGCCGCGAGGACGCAACGGACGAGGAGGTGCGGGAGAACGCGGAGCTCGTGGAGCGGCTCCGCAGCAGCCCCGTGGTGCAGTTCATGGCGCGCGCCGAGGAGATTCTGGACAAGATGAACGAGATGGAGCTGAAGGAGAACGAGAGGCCGTACCACAAGGAGGATTGGGAGGTGTGGAAGAATGTGCCCAATGTTATTGGGCTTGACGGGAGGCCCATGCCCAGAAAAGCCCAGAAAACCCGCGAGGAGGCTGATGATAAGTTTTGGGATTTCGCTAGGCAGTTCTTTTTCGGGCTGTGGAATTTCAGGCAGAGGCCCTACCCTCCTGGGAAGCCCATTGACGCGGCCCAGTCTATTGGGTATAAGAACCTTGAGAGGCGCTACTATGACTTTATCATGAGAAGTGGTGGGTGGTACTATAAGGATCGGCTGGGTCGCACTCGAGGACCGTTAGAATTGATTACGCTTAAAACTGCATGGGGTGCTGGGATTATTGATAAGAACACTTTCATTTGGGGAGAGGATATGGACGAATGGGCGCCCATCCATATGATTTATGGAATGGAGCGTGCAATCGCCACTTGGGAAGTTAGACTTGCTGCTTCCGCAACAGCATTGCTTCACAAACTACAGAAAGGTATACCACCGTGGGTTCCTTTGAAGGGATTTGAAAAGAAGACTTATAAGCAACTTCAAGAAGAGGCTATAGAAAGCAAGAGACGTGATTTAGCAGTATTGGAAGCTAATGATGGTCTTTGGCCTGGAGCTAAAATTCCAAGTCATGCCCTATTTCTTTGGGCTAGTGGCTCTGAACTGACCACTATATTGGAACAGGATCACATGCCCAACAAATACATTCCCAAATATCTTAGAAAGAAGTTGGCTGAAATTATTCCAGGGTTGAGGCCATGGGAAGTTCTGAGCATAGAACAAGCAATGGATCGATTAACATTTAACGGGGAATGGTACCGTGAACCACTTGGTTCATTCACCACTGGTCCCCCATACCTTGAGCACTGGAATAGAGATGTTATGAGGTTGTATAAGATATTTGATGATCTTAACACCGAGTTGTACGAACATATGGAGAATTCAATTGCTGGCTTTGATAAAATTATGGAGAAGATCAGGGATGATTTTATTGCGAGAACTGATAAAATGTTGGAGAAGAAAGACAAAGAGAAAAGAGAAGCTCGGAAGAAAGCTGGGTTGCCTGAGTATCAATGGCCCGAAAAACCATATGTTCCTTAG 1578 0.512 MASINFNPFGGNWFSKPPNPLPLPSLPNTLTDAPSLPPNFAAISLPNPFRRRPKPKSAEPTEPGPYEQLARQVLWECETLPDHRHTPEVDKILADNDAAFGGDDDSVFVRREDATDEEVRENAELVERLRSSPVVQFMARAEEILDKMNEMELKENERPYHKEDWEVWKNVPNVIGLDGRPMPRKAQKTREEADDKFWDFARQFFFGLWNFRQRPYPPGKPIDAAQSIGYKNLERRYYDFIMRSGGWYYKDRLGRTRGPLELITLKTAWGAGIIDKNTFIWGEDMDEWAPIHMIYGMERAIATWEVRLAASATALLHKLQKGIPPWVPLKGFEKKTYKQLQEEAIESKRRDLAVLEANDGLWPGAKIPSHALFLWASGSELTTILEQDHMPNKYIPKYLRKKLAEIIPGLRPWEVLSIEQAMDRLTFNGEWYREPLGSFTTGPPYLEHWNRDVMRLYKIFDDLNTELYEHMENSIAGFDKIMEKIRDDFIARTDKMLEKKDKEKREARKKAGLPEYQWPEKPYVP 525
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma01g01268 525 Pfam GYF domain 2 247 293 IPR025640 -
Gma01g01268 525 MobiDBLite consensus disorder prediction 500 515 - -
Gma01g01268 525 Coils Coil 490 510 - -
Gma01g01268 525 PANTHER PROTEIN TIC 56, CHLOROPLASTIC 1 515 IPR037471 -
Gma01g01268 525 MobiDBLite consensus disorder prediction 500 525 - -
Gma01g01268 525 Coils Coil 338 358 - -
Gma01g01268 525 MobiDBLite consensus disorder prediction 1 66 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma01g01268 Gma-Chr1 45034755 45040494 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma01g01268 - - gmx:100801248 1073.92
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma01g01268 01 45034755 45040494 Gma01g01268 01 45034755 45040494 ECH