Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma01g01162 ATGGCGTCTCTACTGCTAGCATCACCTTCTCCACTCTCCGTTCAATTGCACAATTCCACCTGTCACCTTTCCTTCTCTCACTCCCAAACTCTTTCCTCACCGCTCTCCACTTCCTTTCCTTCTCTCTCAGCCTCTGCAACCACCACTCTCTCCCCAACCCCTTCTGTGTACTGTGGCAGAGGGGACAGGAAAACTGCAAAGGGAAAGCGCTTCGCTCATTCATTTGGAAATGCGAGGCCAAAGGACAAGAAGAAGGGTAGAGGGCCACTGAGGCCTTATGCTCCACCGGCACCTTCCAAAAAAGACAGGTTCGAAGATAATGAGGTGGTGAAGATTGAAATTGACGAGTCTCTCTTTTCTGGTTGA 366 0.5027 MASLLLASPSPLSVQLHNSTCHLSFSHSQTLSSPLSTSFPSLSASATTTLSPTPSVYCGRGDRKTAKGKRFAHSFGNARPKDKKKGRGPLRPYAPPAPSKKDRFEDNEVVKIEIDESLFSG 121
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma01g01162 121 Pfam Ribosomal protein S31e 1 102 IPR030826 GO:0005840
Gma01g01162 121 MobiDBLite consensus disorder prediction 36 106 - -
Gma01g01162 121 PANTHER 30S RIBOSOMAL PROTEIN S31, CHLOROPLASTIC 1 120 IPR044695 -
Gma01g01162 121 MobiDBLite consensus disorder prediction 62 89 - -
Gma01g01162 121 TIGRFAM ribo_THX: ribosomal small subunit protein bTHX 59 83 IPR030826 GO:0005840
Gma01g01162 121 PANTHER 30S RIBOSOMAL PROTEIN S31, CHLOROPLASTIC 1 120 - -
Gma01g01162 121 MobiDBLite consensus disorder prediction 36 55 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma01g01162 Gma-Chr1 41310810 41311695 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma01g01162 K19033 - gmx:100783058 189.504
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma01g01162 01 41310810 41311695 Gma01g01162 01 41310810 41311695 ECH
Gma03g00524 03 10153871 10154965 Gma01g01162 01 41310810 41311695 GST