Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma01g01052 ATGGCAAAGGATAGAACAATTGGTGTGGCTCTAGATTTCTCCAAAAGCAGCAAGAATGCTCTGAAATGGGCATTTGAGAACTTAGCCGATAAAGGTGACACCATTTATGTCATTCACATCAACCCAAACTCTCTAGACGAGTCCCGCAACAAGCTATGGGCAAAATCTGGTTCTCCTCTTATTCCTTTGGTAGAGTTCAGAGAGCCTGAGATTATGAAAAAGTATGATGTTGAAATTGATATTGAGGTTCTTGATATGCTTGACACTGCTTCAAGACAAAAAGAGATCCACATTGTTACAAAAATATATTGGGGGGATGCAAGAGAGAAGCTTTTGGATGCTATTGAAGATCTGAAGCTGGATTCGCTGGTTATGGGAAGCAGGGGCCTCAGCACAATCCAAAGGATCATATTGGGAAGTGTAAGCAACTTTGTGATGACAAATGCTCCTTGCCCTGTGACTATCGTCAAGGAACCACCTAGCAGCAGCAAGTAA 495 0.4222 MAKDRTIGVALDFSKSSKNALKWAFENLADKGDTIYVIHINPNSLDESRNKLWAKSGSPLIPLVEFREPEIMKKYDVEIDIEVLDMLDTASRQKEIHIVTKIYWGDAREKLLDAIEDLKLDSLVMGSRGLSTIQRIILGSVSNFVMTNAPCPVTIVKEPPSSSK 164
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma01g01052 164 Pfam Universal stress protein family 5 157 IPR006016 -
Gma01g01052 164 CDD USP_Like 6 156 - -
Gma01g01052 164 PANTHER OS05G0453700 PROTEIN 4 161 - -
Gma01g01052 164 PANTHER IMP2'P 4 161 - -
Gma01g01052 164 PRINTS Universal stress protein signature 4 22 IPR006015 -
Gma01g01052 164 PRINTS Universal stress protein signature 117 129 IPR006015 -
Gma01g01052 164 PRINTS Universal stress protein signature 135 157 IPR006015 -
Gma01g01052 164 Gene3D HUPs 2 164 IPR014729 -
Gma01g01052 164 SUPERFAMILY Adenine nucleotide alpha hydrolases-like 5 159 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma01g01052 Gma-Chr1 37375430 37376942 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma01g01052 3 156 Receptor kinase-like Gene Family AT5G35380 27.044 3.37e-09 53.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma01g01052 - - gmx:100499951 321.627
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma01g01052 01 37375430 37376942 Gma01g01052 01 37375430 37376942 ECH
Gma18g01753 18 48999652 49001269 Gma01g01052 01 37375430 37376942 PCT
Gma07g01295 07 16992476 16993870 Gma01g01052 01 37375430 37376942 PCT
Gma01g01052 01 37375430 37376942 Gma18g01753 18 48999652 49001269 PCT
Gma01g01052 01 37375430 37376942 Gma07g01295 07 16992476 16993870 PCT