Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma01g00934 ATGGTGAAGGGAGCAGAAGCTGTTCATGCAGCAAATCCAACTGTTCTAGTCATTCTATCTGGGCTAAATTTTGACACAAGCTTGTCATTCATTCGGGACAGACCAGTGAGCCTCACGTTCAAAGGGAAGCTAGTATTTGAGGTGCACAGGTATGGCTTCACTGATGGTGGAGCTTGGGCTAATGGGAACCCAAACCAAGTATGTGGAAAAGTGACAGCAGATATAAAGCAAACATCTACCTTCTTAGTGGACCAAGGATGGCCATTGATTGTGAGTGAATTTGGTGGAGACTTGAGAGGTACCAATGTGAATGACAATCGATACCTTAACTGTTTTCTGGCACTGGTAGCTGAGCTTGACTTGGATTAG 369 0.4472 MVKGAEAVHAANPTVLVILSGLNFDTSLSFIRDRPVSLTFKGKLVFEVHRYGFTDGGAWANGNPNQVCGKVTADIKQTSTFLVDQGWPLIVSEFGGDLRGTNVNDNRYLNCFLALVAELDLD 122
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma01g00934 122 Gene3D Glycosidases 1 121 - -
Gma01g00934 122 Pfam Cellulase (glycosyl hydrolase family 5) 5 107 IPR001547 GO:0004553|GO:0071704
Gma01g00934 122 PANTHER CELLULASE FAMILY PROTEIN (AFU_ORTHOLOGUE AFUA_5G14560) 1 122 - -
Gma01g00934 122 SUPERFAMILY (Trans)glycosidases 3 120 IPR017853 -
Gma01g00934 122 PANTHER GLYCOSIDE HYDROLASE FAMILY 5 PROTEIN 1 122 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma01g00934 Gma-Chr1 30539495 30539863 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma01g00934 1 122 Glycoside Hydrolase AT1G13130 58.197 7.96e-45 150
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma01g00934 - - gmx:100818309 244.588
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma01g00934 01 30539495 30539863 Gma01g00934 01 30539495 30539863 ECH