Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma01g00908 ATGAGCAACGCATATGTTAGCTCAACAATATATGCTGTTAGGTGTAAAGAACCATTCTCATTATCTTTCAATGGCTACTCAAACTTCTGTTACGAAAGATTTGACAGAACCGCATCATACTGTTTGTCATGCTGTGGTTGTTGTGATTTCTGTTCAGTCTCCACTTACAGAGTACCCATAAAACCTTGTCTTATAAATGGGTTGAGGCAATCTGCTCTTCTTCAATTGTCGGCATCTAGAAGGTTGATATTGGGTGGTGGAGACCATTACCTTCCCCGGCTACCAGCTTATGGTGTCCTCAGAGGTTGTCAGGAGCTTAATTCTTCTGTCAATGAGAGAACTGTTTACAATAATAGTAGATGGAGAATAAAGGGAAGATGTATTTGTGCTACTTCCCCGAAAGGGAGAGAATTTTCCCATTCATTTGGTTCTGATGATGCTGAAGCAGTTCTCAGCTTGTTGAGTGAGGAGGCAGATAAGGATGCTATTGGTAGCAAATGTAAGAATGCATCTTCATCAAAAAGAGTGGAAGTTGAGAAGAAAAGAAAAAATCTGAGCAGAGAGAGACATTTTAGTTCAAGTGAGAAAGTAGAAACAGAGAAAAATGGAAATTTGAAGCGACATGAATCATCCACCATAGACTTGAGAAGAGAATATGGAAAAGCCAACAAAGAAAGGGAAGCCTTTGCAAAAAGTGAAAACCATAGGAAACGAAGAGATGCATCTAGTTGTTCATCTTATTACTCTCTCTCATCAGGAGATTTTGGGAGTGAGCTGGAAGTTCAGGATGAGATTGGTTTGGAAGAGTCGTCACTGGAATATGAGAAGGATGAAGCGAATCATCTGGAGGAACAAGTAAAGGAAGAATTCAACAGGCAAGGGGATGACTCAAAGAAGCTGCAGGCTGTTTCAAATAAGCGAAGAATTGCATTTGGTGTGGATATTGATTGGAACCTAAGGAACAAGTCTGAAAAGAAGCTGACTGAGGGAACTCTGCAAAACACTGAATCCACAAGAGAACAACAGGACATGCATTCAAGAGAATTTAGAACACTTGAATCTGGTCATAAAAAATCATCTATTTCACAAAAGCGAGTCAATATTGAGGATGATAAATCATCTTGTGTTGTCAATTTGGATAAGAAAACTAACAAAGCATATATTCAAACTGAGTCTGGTTGTGATGAAGTTGAGACAATTTTGTTATCACAAaaggaattcagtggcagggaagggaagcttgagatatcagaaacaattttgaacgaaacaactgataaacataaaaagtttgttagttcaacttctaccacaggaaagcaaactttgacatcaaagaaggtattcagtggcagggaagggaaccttgcaatatcagaaacacttttacaagaaacaaatgataaacataaaaaaattgttggttctacttctaccactggaaagAATGTGATAGATAGAAGTTCCCAGAAATATACTGGAAATTTAAAAATTGAAGACACTGAAAGGACCTCAAATACTAGGATGAAGGACATGGAAGTGAAAAAAGATTCAGTTTTGAGTTCTGTTCAGGGAGTGGAGGAGCAGCAATACCAAAAAGGAGAGAAGATCATTAAGGTGAAGGATAAAGAGAGAAGAAAAAAATCTGAACAATTTTCTGAAGTATCAGAAGCTCACAAGATCAATGTTGAAGATACATCTAGCATAAAGTCTAGAACTAGATTAATGAACATGGAAGAAAAATCGAACATAAGCTCAGATGCAAGGGTTACGTGGCTCCAAACAGATAAAAGGACAACTCAGAGTTTCCAACACAGGAAAGGATCTGAACTTGTCAGCACTTTATCAGAAGGCTATGCCAGTGATGAAAAGCAAGTTTCAAGTTCTCAAAAAGCTTATGAGAAGGTGAGATTAATTCCAAAAAGTAAATCAACATCAGTTGTTAGAACTAGAGAAAGTTCTAGCCAAACTGATGAAAGGATTGCAAATTTTGAATTGGCCAGAGACGACCAAAGATCTAGCAACCTTTCAATTTCTGATGAAACTACCTCAAGAGAGGAATCCAGCTCCCAGGGATCATTGAATTTGATTTCTGGGGCTGGAAAACATATTATATTAGCATCAGGTGAAAAAAGGAGGCCTGCAACAATGTTGATCCCTTCCTCTTCTGAAATTGGTGGAGACTCAGCACATGTTGAACTCACTGCAGGAATTGCAAGCCCTGAGATCTTCCTTGGAACTTCAGAAAGTGGCTCTTCTGCTTTGTATGACAATTCAGGAAGAAGGTCTGCTTTGCATCCAGATGCTATTGATTCAGCTGATCGTTTAGAGAAGTCATCTAGACAGTTTGTTGATGAGTTTGCTGAGAGGATCAGGCATGAAGTAACGACTTCAGAAGCACAAGAGATGGAAGTTACAGGAACAAAATTGAATCTTGAAGTTGGGGGTGATCAGATCTACAGCTCAAGGCAACAAGGCACTCAAAATGGTGCTCAGTCAAAGGAGCATGATTCTAGTCGTTCCTCTGGGTTTCCTGGGACCAAAGGACCTTCTGATGAGATGTGGGATGTCACAGAACCATCTGCTGAGCAAGTTCTAGTAGCCAAAGAAACAGAGATCAGCAAGGAAACTGGGAAAGCAGTTGTTACTAGAACTGGGAGGTCCTTATGGGGTATGATTGCTGATATTGTTCGATTACGTTGGGGTTCACGTGCTGGTTCCTCCACTTCTGCTGAGAGAAATTCACCAAACAAGTCTGACAGTGACACATGGTTTTCTGGGCAGGAGCATGAGGAAACCACTAAAACTAATGTCATAAAAGAAACAAGTGTACCACCACAAGCCATGACTTTTGATAAGTTAAAACCGGGTAAACATTATACCCAAAGTGAGGGAGAGGTGTCCGACAATACAAAACTGAAGGACAAAGGAAAAAATGTTGAAGTTGGATTGTCATCCCCAAATACATTGGAAAGTGGATCAATGTTAGTAGGCGTATCTTACACTTCTGGAGAGGAAAATGCTAGTTGGACTGAAGATAAAAAAAATTTGAAAGTCAATACTTCTGGCACTCAAAACATGGAATTACCAATTTCAGTACCTGCCAGAGGGCCTTCTATTGTTGGAGAAATTATAAGCATTGGTGGATCTGACATGTCTGGAGCTGAATCAGTGGTTCCAATCAAGGAATCTGTTGCTCCTGGGCAGTCTGAATTGTCCGGCTCAGAGAGAAAGGATGGAGAGTTGAAGCAAAGGAAGTTTCAACGGAACAGGCAAGTCTTAAGAGATAGGTTTGATGACTGGGAAGAAGCCTATCAACGTGAACTTGAGCAGCGAAGAGTAGATGAAATGTTCATGAAGGAAGCACTTTTGGAAGCCAAGAAGGCTGCTGATACATGGGAGGTACCTGTTGGAGCTGTTCTTGTGCAGCATGGGAAAATTATTGCTCGAGGCTGCAACTTAGTAGAAGAGTTACGGGACTCCACTGCCCATGCAGAGATGATTTGTATACGAGAAGCTTCAAACCTTCTCCGATCATGGAGACTATCAGACACTACACTTTATGTAACGCTTGAGCCATGTCCAATGTGTGCTGGTGCTATCCTGCAGGCAAGAGTAGACACTGTTGTGTGGGGTGCTCCCAATAAGCTTCTTGGAGCTGATGGTAGCTGGATTAGAATTTTCCCTGATGGAGGAGAAAATGTATCAGAACAAAGAGATATACCTCCTGCCCCAGTTCATCCATTCCATCCAAACATGAAAATAAGAAGAGGGGTCTTGGCCACTGAGTGTGCGGATGCAATGCAACAATTCTTTCAGCTAAGAAGGAAAAAGAAGAAAGAGGAACCGTCAAATGACCCTTCTTGCCTTCCTGTTACTCACCACCCCTCCAAGTTACTCAACAAGATACATGACGTCTTCCACATCATGTTTTGTTTGTAA 3942 0.3853 MSNAYVSSTIYAVRCKEPFSLSFNGYSNFCYERFDRTASYCLSCCGCCDFCSVSTYRVPIKPCLINGLRQSALLQLSASRRLILGGGDHYLPRLPAYGVLRGCQELNSSVNERTVYNNSRWRIKGRCICATSPKGREFSHSFGSDDAEAVLSLLSEEADKDAIGSKCKNASSSKRVEVEKKRKNLSRERHFSSSEKVETEKNGNLKRHESSTIDLRREYGKANKEREAFAKSENHRKRRDASSCSSYYSLSSGDFGSELEVQDEIGLEESSLEYEKDEANHLEEQVKEEFNRQGDDSKKLQAVSNKRRIAFGVDIDWNLRNKSEKKLTEGTLQNTESTREQQDMHSREFRTLESGHKKSSISQKRVNIEDDKSSCVVNLDKKTNKAYIQTESGCDEVETILLSQKEFSGREGKLEISETILNETTDKHKKFVSSTSTTGKQTLTSKKVFSGREGNLAISETLLQETNDKHKKIVGSTSTTGKNVIDRSSQKYTGNLKIEDTERTSNTRMKDMEVKKDSVLSSVQGVEEQQYQKGEKIIKVKDKERRKKSEQFSEVSEAHKINVEDTSSIKSRTRLMNMEEKSNISSDARVTWLQTDKRTTQSFQHRKGSELVSTLSEGYASDEKQVSSSQKAYEKVRLIPKSKSTSVVRTRESSSQTDERIANFELARDDQRSSNLSISDETTSREESSSQGSLNLISGAGKHIILASGEKRRPATMLIPSSSEIGGDSAHVELTAGIASPEIFLGTSESGSSALYDNSGRRSALHPDAIDSADRLEKSSRQFVDEFAERIRHEVTTSEAQEMEVTGTKLNLEVGGDQIYSSRQQGTQNGAQSKEHDSSRSSGFPGTKGPSDEMWDVTEPSAEQVLVAKETEISKETGKAVVTRTGRSLWGMIADIVRLRWGSRAGSSTSAERNSPNKSDSDTWFSGQEHEETTKTNVIKETSVPPQAMTFDKLKPGKHYTQSEGEVSDNTKLKDKGKNVEVGLSSPNTLESGSMLVGVSYTSGEENASWTEDKKNLKVNTSGTQNMELPISVPARGPSIVGEIISIGGSDMSGAESVVPIKESVAPGQSELSGSERKDGELKQRKFQRNRQVLRDRFDDWEEAYQRELEQRRVDEMFMKEALLEAKKAADTWEVPVGAVLVQHGKIIARGCNLVEELRDSTAHAEMICIREASNLLRSWRLSDTTLYVTLEPCPMCAGAILQARVDTVVWGAPNKLLGADGSWIRIFPDGGENVSEQRDIPPAPVHPFHPNMKIRRGVLATECADAMQQFFQLRRKKKKEEPSNDPSCLPVTHHPSKLLNKIHDVFHIMFCL 1313
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma01g00908 1313 Gene3D Cytidine Deaminase, domain 2 1103 1288 - -
Gma01g00908 1313 MobiDBLite consensus disorder prediction 1064 1084 - -
Gma01g00908 1313 MobiDBLite consensus disorder prediction 173 251 - -
Gma01g00908 1313 MobiDBLite consensus disorder prediction 823 846 - -
Gma01g00908 1313 Coils Coil 1091 1111 - -
Gma01g00908 1313 MobiDBLite consensus disorder prediction 905 934 - -
Gma01g00908 1313 Pfam MafB19-like deaminase 1116 1215 IPR028883 GO:0002100|GO:0008251
Gma01g00908 1313 ProSiteProfiles Cytidine and deoxycytidylate deaminases domain profile. 1113 1235 IPR002125 -
Gma01g00908 1313 MobiDBLite consensus disorder prediction 173 242 - -
Gma01g00908 1313 SUPERFAMILY Cytidine deaminase-like 1112 1280 IPR016193 GO:0003824
Gma01g00908 1313 PANTHER TRNA(ADENINE(34)) DEAMINASE, CHLOROPLASTIC 864 1303 - -
Gma01g00908 1313 MobiDBLite consensus disorder prediction 949 971 - -
Gma01g00908 1313 MobiDBLite consensus disorder prediction 905 923 - -
Gma01g00908 1313 MobiDBLite consensus disorder prediction 668 695 - -
Gma01g00908 1313 CDD nucleoside_deaminase 1119 1226 - -
Gma01g00908 1313 MobiDBLite consensus disorder prediction 823 855 - -
Gma01g00908 1313 PANTHER CYTOSINE DEAMINASE FAMILY MEMBER 864 1303 - -
Gma01g00908 1313 MobiDBLite consensus disorder prediction 326 364 - -
Gma01g00908 1313 Coils Coil 272 292 - -
Gma01g00908 1313 MobiDBLite consensus disorder prediction 340 364 - -
Gma01g00908 1313 Hamap tRNA-specific adenosine deaminase [tadA]. 1119 1276 IPR028883 GO:0002100|GO:0008251
Gma01g00908 1313 MobiDBLite consensus disorder prediction 666 695 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma01g00908 Gma-Chr1 28993094 29002951 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma01g00908 K11991 - gmx:100788560 2504.94
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma01g00908 01 28993094 29002951 Gma01g00908 01 28993094 29002951 ECH