Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma01g00699 ATGGATGATGCGATGGGTCCTGACTTGATCAGTGATCTTCCTCAAAGCATTATAGAGAGCATTCTGGTACAGCTTCCAATTAGAGATGCTGTGAGAACTAGCATCTTGTCTAGTAAATGGAGGTATAAATGGGCTTCAATTACTCGACTTGTGTTTGATGACAAATGTGTGCCCTTTAGTAATGATAGGGAGGTTGTTGAGAAGAGTGTTGTCAAGTTCATCACCAGGGTGTTGTTTCTTCGCCAAGGGCCAATTCATAAGTTCCAAATCACGAATTCGAAGTTGCAGAGTTGTCCTGAAATTGATCAGTGGATTCTTTTCCTTTCGAGGAATGATATCAAGGAGTTGGTTATGGAATTGGGAGAAGGGGAGTTTTTTAGAATACCTTCAAGCCTTTTCAATTGTGGGAAGTTGACCCGGTTGGACCTATCGCGGTGCGAGTTCGATCCGCCACATAGTTTTAAGGGGTTTGTGTGCTTAAGGAGCCTCAACCTCCATCAAGTTTTGATATCCCCTGATGCAATTGAGAGCCTCATTTCTAGATGTCCTCTCTTGGAGAGTTTGTCACTTTCTTACTTTGATAATTTGGCTCTTACTATCTGTGCCCCGAATCTTAAGTACTTGTATCTTGAAGGTGAATTCAAGGATATATGTCTTGAAGATACCCCACTTTTGGTTGAAATAACCATTGCTATGTATATGACTGATGACATTGCTGAGCACTTTGAGCAAATCTCAAACTGCAATTTTGTCAAGTTTCTTGGTGGCGTGCCTAATCTTGAGAAGCTTGTTGGACTTATCTACTTCACAAAGTATTTGAGCATAGGTATTGACTTTGTGCATCCTCCAATGATGTACAACAATTTGGAGACTATTGAATTGTATCAAGTAAATTTTGAGGATATGGTAGAGATACTTGTCATCCTTCGCTTGATTACAAGCTCTCCCAATCTAAAAGAACTACAAATTTCTGGTTCTTCAAACATACCAGTTTCTGTAGATACCCCAGACTTGGATTTTTGGGAAAAAGAATGCCTTTCAGATTCTACACTTAACAAGCTTAAAACCGTGAAGTTGTCAGAAATGGGTGGTTGGCTACATGAGATTGAAATTATCAAATATTTGCTTGGCCATTCTCCTGTTCTTGAGACATTGAGTATCATTCCTTGTGTATTTGATGTGGAGAATAATTTGAAAATGTTGATTGAATTGGTGAAATGTCAAAGAGCTTCTACTAGAGCGGAAGTTATTTTCACCCGCCAGTGA 1266 0.3949 MDDAMGPDLISDLPQSIIESILVQLPIRDAVRTSILSSKWRYKWASITRLVFDDKCVPFSNDREVVEKSVVKFITRVLFLRQGPIHKFQITNSKLQSCPEIDQWILFLSRNDIKELVMELGEGEFFRIPSSLFNCGKLTRLDLSRCEFDPPHSFKGFVCLRSLNLHQVLISPDAIESLISRCPLLESLSLSYFDNLALTICAPNLKYLYLEGEFKDICLEDTPLLVEITIAMYMTDDIAEHFEQISNCNFVKFLGGVPNLEKLVGLIYFTKYLSIGIDFVHPPMMYNNLETIELYQVNFEDMVEILVILRLITSSPNLKELQISGSSNIPVSVDTPDLDFWEKECLSDSTLNKLKTVKLSEMGGWLHEIEIIKYLLGHSPVLETLSIIPCVFDVENNLKMLIELVKCQRASTRAEVIFTRQ 421
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma01g00699 421 Pfam FBD 351 387 IPR006566 -
Gma01g00699 421 SMART 9598neu4hmm 344 419 IPR006566 -
Gma01g00699 421 PANTHER - 8 398 - -
Gma01g00699 421 PANTHER F-BOX PROTEIN-LIKE 8 398 - -
Gma01g00699 421 SUPERFAMILY F-box domain 5 60 IPR036047 GO:0005515
Gma01g00699 421 SUPERFAMILY RNI-like 105 403 - -
Gma01g00699 421 ProSiteProfiles F-box domain profile. 7 41 IPR001810 GO:0005515
Gma01g00699 421 Gene3D Ribonuclease Inhibitor 66 412 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma01g00699 Gma-Chr1 13473308 13474845 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma01g00699 4 214 EF-hand Containing Proteins AT5G41840 24.490 3.74e-08 53.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma01g00699 - - gmx:100806947 842.032
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma01g00699 01 13473308 13474845 Gma01g00699 01 13473308 13474845 ECH