Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma01g00691 ATGGCCATGGCGGTTTCTGCAATTGGTTTTGAAGGTTTCGAGAAGAGGCTGGAAATATCCTTTTTCCAGCCGGGACTTTTTGCTGACCCTGAGGGAATGGGTTTAAGAGCTCTTGCAAAGTCCCAGTTGGATGAGATACTTACACCGGCTGCTTGCACCATTGTTTCATCTCTCAGAAATGATCATGTCGACTCCTATGTTCTGTCTGAGTCCAGTCTCTTTGTTTATGCCTACAAGATCATCATCAAAACCTGTGGTACTACAAAGCTACTGCTTGCAATCCCACCCATATTGAAATTTGCTGAAATGCTTTCCCTCAATGTTAGATCTGTGAATTACACCAGGGGAAGTTTCATCTTTCCCGGTGCTCAGCCCTATCCCCATCGCAACTTTTCTGAGGAAGTTGCTATTCTTGATGGCTACTTTGGCAAGCTTAGTGCAGGAAGCAATGCTTATATTTTGGGTGGCCAAGACAAATCACAGAACTGGCATGTCTACTCTGCTTCTGCAGATTCTGTAACTCCATGCGACAATGTTTACACTCTAGAGATGTGCATGACTGGCCTGGATAGAGAGAAAGCACAGGTTTTCTACAAAGAACAATCTGCTTCAGCTGCCATTATGACTGTTAATTCTGGCATTAGAAAAATTCTTCCAGATTCTGAGATTTGTGACTTTGACTTTGAGCCATGTGGTTATTCAATGAACTCTGTTGAAGGTGCTGCTGTTTCTACCATTCATGTTACCCCAGAAGATGGTTTCAGTTATGCAAGCTTTGAGACTGTTGGGTATGACTTCAAAGTGGTGAATCTGAACGAAATGGTTAAGAGGGGATACTGTCGCGAAGAGAGGAGCCACGAAGGGCTTGGAATGGGTGGTTCTCTTGTCTACCAAAAATTTGCCAAGACTTGTGACTGTGGTTCACCTAGATCAACTCTGAAGTGCTGGAAAGAGGAAGATGAAGAAGAGTAG 972 0.4383 MAMAVSAIGFEGFEKRLEISFFQPGLFADPEGMGLRALAKSQLDEILTPAACTIVSSLRNDHVDSYVLSESSLFVYAYKIIIKTCGTTKLLLAIPPILKFAEMLSLNVRSVNYTRGSFIFPGAQPYPHRNFSEEVAILDGYFGKLSAGSNAYILGGQDKSQNWHVYSASADSVTPCDNVYTLEMCMTGLDREKAQVFYKEQSASAAIMTVNSGIRKILPDSEICDFDFEPCGYSMNSVEGAAVSTIHVTPEDGFSYASFETVGYDFKVVNLNEMVKRGYCREERSHEGLGMGGSLVYQKFAKTCDCGSPRSTLKCWKEEDEEE 323
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma01g00691 323 TIGRFAM SAM_DCase: S-adenosylmethionine decarboxylase proenzyme 10 277 IPR001985 GO:0004014|GO:0006597|GO:0008295
Gma01g00691 323 ProSitePatterns S-adenosylmethionine decarboxylase signature. 65 75 IPR018166 GO:0004014
Gma01g00691 323 PANTHER S-ADENOSYLMETHIONINE DECARBOXYLASE PROENZYME 3 277 320 - -
Gma01g00691 323 PANTHER S-ADENOSYLMETHIONINE DECARBOXYLASE PROENZYME 3 1 277 - -
Gma01g00691 323 Gene3D - 1 70 - -
Gma01g00691 323 PIRSF SAM_decarbox_euk 1 278 IPR001985 GO:0004014|GO:0006597|GO:0008295
Gma01g00691 323 PANTHER S-ADENOSYLMETHIONINE DECARBOXYLASE 1 277 IPR001985 GO:0004014|GO:0006597|GO:0008295
Gma01g00691 323 Gene3D - 71 303 - -
Gma01g00691 323 PANTHER S-ADENOSYLMETHIONINE DECARBOXYLASE 277 320 IPR001985 GO:0004014|GO:0006597|GO:0008295
Gma01g00691 323 SUPERFAMILY S-adenosylmethionine decarboxylase 13 302 IPR016067 GO:0004014|GO:0008295
Gma01g00691 323 Pfam Adenosylmethionine decarboxylase 9 277 IPR001985 GO:0004014|GO:0006597|GO:0008295
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma01g00691 Gma-Chr1 13265107 13266174 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma01g00691 K01611 - gmx:121172625 638.262
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma01g00691 01 13265107 13266174 Gma01g00691 01 13265107 13266174 ECH