Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma01g00655 ATGGCTCCTGTGCCGAGCAGAACCGTGGCCACGGCCTCTCTCGCCTCGCTCCTTCCTTCTTCCCCCTTCGCGAGGGCTTCTCTTCTCAGAAGCGCTTTTCTGCCGCCGCAAATAGGGCGCGACAGGAAGTGCTTCTCCCCCGCCGCAGGGCTGCGGTGGACGCAGCGGCGCCAGGGGAGGAGGGACGGGCTCGCCGTGCGGTGCGAGGCCGCCGTGGCGGAGAAGGACGAGGCCACCGGTGAGAAGTTTGAGTACCAGGCCGAGGTGAGTCGATTGTTGGATTTGATTGTTCACAGTCTGTATAGCCACAAGGAAGTTTTCCTTCGTGAACTTGTCAGTAATGCTAGTGATGCTTTGGACAAGTTGAGATTCTTAAGTGTGACTGAGCCTTCTTTGCTTGGAGATGCTGGAGATCTAGAGATACATATCAAGTCTGATCCAGACAATGGAACTATTACTATAACAGATACTGGTATTGGAATGACTAAAGAAGAGCTCATTGATTGTCTTGGAACTATTGCTCAGAGTGGTACCTCAAAATTTTTGAAGGCACTTAAGGAAAACAAGGATCTAGGAGCAGATAATGGTCTGATTGGTCAATTTGGTGTTGGATTCTACTCTGCTTTTCTTGTTGCTGGGAGGGTTGTCGTGTCTACAAAGAGCCCAAGATCAGATAAGCAGTATATGTGGGAAGCAGAAGCTGACAGTAGCTCTTATGTGATAAAAGAAGAAACTGATCCTGAAAAGTTTCTGCGTCGTGGTACACAGATTACACTCTATTTAAGAGAGGATGACAAGTATGAATTCTCAGAGCCAAGCAGGATTCAGGGTTTGGTGAAGAATTACTCTCAGTTCGTTTCCTTCCCCATCTACACATGGCAAGAAAAGTCAAGAACTGTGGAGGTGGAAGAGGAggaagaacccaaagaaggggaagaaccaaaagaagAGGGTGAGAAAAAGAAGGTGAAAAAGACTAAAACTGAGAAGTACTGGGACTGGGAATTGGCCAATGAAACAAAGCCAATATGGATGCGCAACCCAAAGGAAGTTGAAAAGGAGGAGTACAATGAATTTTATAAGAAGACATTTAGTGAATTCTTAGAACCACTTGCACATACTCACTTCACTACTGAGGGTGAGGTTGAGTTCAGAAGTATTCTGTATGTTCCGGGAATGGGACCTCTTAACAATGAAGAAGTAGTGAACCCTAAAACAAAGAACATACGCTTGTATGTTAAGCGTGTATTCATTTCAGATGATTTTGATGGGGAGCTGTTTCCACGTTACCTGAGCTTTGTGAGGGGTGTGGTTGATTCAGATGATCTTCCTCTCAATGTTTCTCGGGAGATCCTTCAAGAAAGCAGAATTGTAAGAATAATGAGAAAGAGACTTGTAAGGAAGGCATTTGATATGATTCAAGACCTTGCTGAAAGTGAAAATAAAGAGGACTACAAAAAATTCTGGGAGAACTTTGGTAGGTTCATAAAATTAGGTTGCATTGAAGACACTGCAAATCATAAGCGCATTACACCACTATTGAGGTTTTACACTTCCAAAAGTGAGGAGGAGCTTAAAAGCCTAGATGATTATGTTGAAAATATGGGTGAAAACCAAAAGGCTATCTTTTATCTAGCAACTGACAGCTTGAAGAGTGCAAAGACTGCTCCATTTTTGGAGAAATTGGTTCAAAAAGATATTGAGGTTCTTTATTTGGTCGAACCTATTGATGAGGTTGCCATTCAGAACCTACAGACATACAAAGAAAATAAATTTGTTGATATCAGCAAGGAGGATTTGGAATTAGGTGATGAGGACGAGGTCAAAGAGAGGGAAAACAAGCAAGAATACAACCTACTCTGTGATTGGATAAAACAACAACTTGGTGACAAGGTGGCCAAAGTTCAAATCTCAAAGCGCTTGAGTTCATCTCCCTGTGTGCTTGTATCAGGGAAGTTTGGTTGGTCTGCAAACATGGAGAGACTAATGAAGGCGCAAGCCCTTGGGGACACTGCAAGTTTGGAGTTTATGAGGGGGAGGAGAATATTGGAAATTAATACAGATCACCCTATTATCAAAGACTTGAGTGCTGCCTGCAAGAATGCACCTGACAGCAGCGAAGCTAAGCGAGCAGTTGACCTCTTATATGACACAGCACTAATTTCTAGTGGATTTTCTCCTGACAGCCCTGCTGAGTTGGGAAATAAGATTTATGAAATGATGGCCTTGGCCTTGGGAGGAAGATGGGGTAGATCAGAAGAAGAGGAGGGAGATGCACCTGTTGAAGCTGCTGATTCAAGCACAAGTGAAGAAAGTTCAGAGCCAGAAGTTTATGAACCTTCTGAAGTCATTGCAGAGAGTGATCCATGGACAACTGATTAG 2382 0.4332 MAPVPSRTVATASLASLLPSSPFARASLLRSAFLPPQIGRDRKCFSPAAGLRWTQRRQGRRDGLAVRCEAAVAEKDEATGEKFEYQAEVSRLLDLIVHSLYSHKEVFLRELVSNASDALDKLRFLSVTEPSLLGDAGDLEIHIKSDPDNGTITITDTGIGMTKEELIDCLGTIAQSGTSKFLKALKENKDLGADNGLIGQFGVGFYSAFLVAGRVVVSTKSPRSDKQYMWEAEADSSSYVIKEETDPEKFLRRGTQITLYLREDDKYEFSEPSRIQGLVKNYSQFVSFPIYTWQEKSRTVEVEEEEEPKEGEEPKEEGEKKKVKKTKTEKYWDWELANETKPIWMRNPKEVEKEEYNEFYKKTFSEFLEPLAHTHFTTEGEVEFRSILYVPGMGPLNNEEVVNPKTKNIRLYVKRVFISDDFDGELFPRYLSFVRGVVDSDDLPLNVSREILQESRIVRIMRKRLVRKAFDMIQDLAESENKEDYKKFWENFGRFIKLGCIEDTANHKRITPLLRFYTSKSEEELKSLDDYVENMGENQKAIFYLATDSLKSAKTAPFLEKLVQKDIEVLYLVEPIDEVAIQNLQTYKENKFVDISKEDLELGDEDEVKERENKQEYNLLCDWIKQQLGDKVAKVQISKRLSSSPCVLVSGKFGWSANMERLMKAQALGDTASLEFMRGRRILEINTDHPIIKDLSAACKNAPDSSEAKRAVDLLYDTALISSGFSPDSPAELGNKIYEMMALALGGRWGRSEEEEGDAPVEAADSSTSEESSEPEVYEPSEVIAESDPWTTD 793
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma01g00655 793 Pfam Hsp90 protein 268 771 IPR001404 GO:0005524|GO:0006457|GO:0016887|GO:0051082|GO:0140662
Gma01g00655 793 Gene3D - 598 745 IPR037196 -
Gma01g00655 793 Gene3D - 338 510 - -
Gma01g00655 793 MobiDBLite consensus disorder prediction 301 322 - -
Gma01g00655 793 Gene3D - 69 311 IPR036890 -
Gma01g00655 793 Pfam Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 104 263 IPR003594 -
Gma01g00655 793 PIRSF HSP90_HTPG 55 782 IPR001404 GO:0005524|GO:0006457|GO:0016887|GO:0051082|GO:0140662
Gma01g00655 793 SUPERFAMILY Ribosomal protein S5 domain 2-like 340 598 IPR020568 -
Gma01g00655 793 MobiDBLite consensus disorder prediction 749 793 - -
Gma01g00655 793 PANTHER HEAT SHOCK PROTEIN 90-5, CHLOROPLASTIC 25 784 - -
Gma01g00655 793 CDD HATPase_Hsp90-like 90 286 - -
Gma01g00655 793 SUPERFAMILY ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase 81 296 IPR036890 -
Gma01g00655 793 SUPERFAMILY HSP90 C-terminal domain 620 741 IPR037196 -
Gma01g00655 793 ProSitePatterns Heat shock hsp90 proteins family signature. 101 110 IPR019805 GO:0005524|GO:0006457|GO:0051082
Gma01g00655 793 Gene3D - 511 597 - -
Gma01g00655 793 Hamap Chaperone protein HtpG [htpG]. 73 742 IPR001404 GO:0005524|GO:0006457|GO:0016887|GO:0051082|GO:0140662
Gma01g00655 793 SMART HKATPase_4 103 265 IPR003594 -
Gma01g00655 793 PRINTS 90kDa heat shock protein signature 81 101 IPR020575 -
Gma01g00655 793 PRINTS 90kDa heat shock protein signature 102 124 IPR020575 -
Gma01g00655 793 PRINTS 90kDa heat shock protein signature 151 168 IPR020575 -
Gma01g00655 793 PRINTS 90kDa heat shock protein signature 169 186 IPR020575 -
Gma01g00655 793 PRINTS 90kDa heat shock protein signature 198 220 IPR020575 -
Gma01g00655 793 PRINTS 90kDa heat shock protein signature 253 270 IPR020575 -
Gma01g00655 793 PRINTS 90kDa heat shock protein signature 272 290 IPR020575 -
Gma01g00655 793 PANTHER HEAT SHOCK PROTEIN 90 FAMILY MEMBER 25 784 IPR001404 GO:0005524|GO:0006457|GO:0016887|GO:0051082|GO:0140662
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma01g00655 Gma-Chr1 11523441 11534088 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma01g00655 K09487 - gmx:100785017 1457.58
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma01g00655 01 11523441 11534088 Gma01g00655 01 11523441 11534088 ECH