Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma01g00647 ATGAATAGCCAGTATCTCATCACCCTTTCTTTTGTGTTATTAACTTTGGTTTTACCCCTATCATCAGCAACGAACTCATTTGAGTCGTATGACACAAAAAAGTTTCCAGCTTTGTATGTTTTTGGTGATTCCCTGATTGATTGTGGGAACAACAATCATCTTCCAAGCGGTGGAGCAGATTATCTTCCTTATGGTATAGATTTTATGGGTGGCAACAAACCTACCGGTCGTGCCACTAATGGAAAAACCGTGGCTGATTTCCTTGCTATGCATCTAGGACTACCCTTTGTCCGTCCCTACTTGGATCTTACAAATCATCAAAGGAACAAAATCAGCACTGGCATTAATTATGCATCTGGTGGGTCTGGCATTCTTCCAGACACCAACAACGTCACGTCTTTGACACTTGACAAGCAAATTAAGTTCTTCCATAGTACTGTTAAGCATAATTTGCATAAGGTGTTCAAAGAGAAAGAAGAAATTGAGATGCATTTATCTGAATCCTTGTTTTTTGTCTCTACGGGGGTGAACGATTACTTCCATAATGGAACCTTCCGCGGCAACAAAAACCTTGCTTTGTTCCTGCTAAATGAATTCACCCTACGCATCCAGAGAATATATAATCTAGGAGCAAGAAAGTTTTTGGTGAACAACATTCCCCCAGCAGGTTGCTTTCCCTCAAAAGCTATCCGCGCTAGACCAAGAGGAAAATGTGATGAGAAAATAAACAAAGCTATCAGCTTTTACAATAGAAGGTTGCCTGAAGTGCTCCATGAGTTGCAGTCAAAGCTTCCTGGCTTCAGCTTTGTACATGCAGATCTCTTTGGGTTCCTTAAGGGGGTGAGGGAAACTGGAAAGAGTTATGGGATAGTGGAAACATGGAAGCCTTGCTGCCCTAACACCATTTATGGTGATCTTAAATGCCATCCCAACACTGTTCCTTGTCCAAACAGAGATACTCATCTTTTCTGGGATGAACACCCCACACAAATTGTAAACCAAATATATGCATGGCTTTGCTTCAATGAGGGGACCATTTGCAAGTCCTGGGGCCTCAAACTAATCTACCATGCCTAG 1077 0.4188 MNSQYLITLSFVLLTLVLPLSSATNSFESYDTKKFPALYVFGDSLIDCGNNNHLPSGGADYLPYGIDFMGGNKPTGRATNGKTVADFLAMHLGLPFVRPYLDLTNHQRNKISTGINYASGGSGILPDTNNVTSLTLDKQIKFFHSTVKHNLHKVFKEKEEIEMHLSESLFFVSTGVNDYFHNGTFRGNKNLALFLLNEFTLRIQRIYNLGARKFLVNNIPPAGCFPSKAIRARPRGKCDEKINKAISFYNRRLPEVLHELQSKLPGFSFVHADLFGFLKGVRETGKSYGIVETWKPCCPNTIYGDLKCHPNTVPCPNRDTHLFWDEHPTQIVNQIYAWLCFNEGTICKSWGLKLIYHA 358
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma01g00647 358 CDD SGNH_plant_lipase_like 36 342 IPR035669 -
Gma01g00647 358 PANTHER GDSL-LIKE LIPASE/ACYLHYDROLASE-RELATED 1 355 - -
Gma01g00647 358 SUPERFAMILY SGNH hydrolase 36 270 - -
Gma01g00647 358 Pfam GDSL-like Lipase/Acylhydrolase 38 335 IPR001087 GO:0016788
Gma01g00647 358 PANTHER GDSL-LIKE LIPASE/ACYLHYDROLASE 1 355 - -
Gma01g00647 358 Gene3D SGNH hydrolase 25 344 IPR036514 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma01g00647 Gma-Chr1 11182467 11185580 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma01g00647 36 337 Acyl Lipid Metabolism Gene Families AT4G10950 35.127 2.30e-48 166
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma01g00647 - - gmx:100797896 736.487
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma01g00647 01 11182467 11185580 Gma01g00647 01 11182467 11185580 ECH