Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma01g00500 ATGAAGGGAGATTGGTTGGAATTGGAGTTGGAGAAGGAAATAGGAGACGCCATTTCCCGAACCCGATTCGCGCCCCACTCTAACACCCTCCTCATCTCTTCTTGGGACTCCAGTCTTCGCCTCTTCGACGTCGACGCCTCTCTCCTCAGACTCCAAGCTCCCTCGCAAGCTCCCCTCCTCGATTGCTGCTTCCAGGACGACGCTGTGGCCTTCGCCGCCGCCTCTGATGGACTAATCCGAAGGTATGACTTGCATTCAGGACTTGTTGATACACTGGGTAGTCACGATGATATGGCAACATGTATTGGATATTCCAATGAAACATGTCAGTTGGTCACATCCGGATTTGACAAAAAGTTACTGTTATGGGACATGCATATGAAGAAGACTTCTTTATGTTTGAGAAGTCTAGATGCAGAGGTGGACTCCATGTCTGTCTCTGGATTTAATGTTACCGTAGCCATTGGAGCATCAATGCTTGTTTATGATTTACGTTACTTTGACCAACCAGTTGAGTCAAAAGAGGCATTCAATGGAACACACTTAAGATGTGTCAGTTCAATTCCAGATGCAGAAGGATTCGCAGTTGGGTCTGTAGACGGACGAGTATCACTGCAGATTTCCAATCCATTCAGTTCAAACGACATTAGatatatattccggtgtcatccaaaatcaaaggatggacggcattatttggtatcagtgaacgacattgcattcagtccactTGTATCTGGTGCCTTTGCCACTGGTGACAATGAAGGTTATGTTACCATATGGGATGCTGGAAGTAGGAGAAGACTAGTTGAGTTGCCCAGGTATCCAAATAGTGTTGCATCCTTATCATACAACCACACAGGTCAGCTTCTGGCTGTAGCATCAAGCCATACTTACCAAGAAGCAAAGGAAATAGAAAAACCACCTCTAAGAGAAGTTGAAGCACTTATGCTATGCTTGCTGACGAAGATTTGTGTCATCAGAGACACAAGTGGAGGCACCGGTGAAGAAAATAGATGCTCTTTAAAAAGGGATACTGGGAGATCAAGAAAAATATTGGAGGAAAATATTAAAAGAGTTTGA 1083 0.4155 MKGDWLELELEKEIGDAISRTRFAPHSNTLLISSWDSSLRLFDVDASLLRLQAPSQAPLLDCCFQDDAVAFAAASDGLIRRYDLHSGLVDTLGSHDDMATCIGYSNETCQLVTSGFDKKLLLWDMHMKKTSLCLRSLDAEVDSMSVSGFNVTVAIGASMLVYDLRYFDQPVESKEAFNGTHLRCVSSIPDAEGFAVGSVDGRVSLQISNPFSSNDIRYIFRCHPKSKDGRHYLVSVNDIAFSPLVSGAFATGDNEGYVTIWDAGSRRRLVELPRYPNSVASLSYNHTGQLLAVASSHTYQEAKEIEKPPLREVEALMLCLLTKICVIRDTSGGTGEENRCSLKRDTGRSRKILEENIKRV 360
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma01g00500 360 SMART WD40_4 7 43 IPR001680 GO:0005515
Gma01g00500 360 SMART WD40_4 213 262 IPR001680 GO:0005515
Gma01g00500 360 SMART WD40_4 85 124 IPR001680 GO:0005515
Gma01g00500 360 SMART WD40_4 45 83 IPR001680 GO:0005515
Gma01g00500 360 Gene3D - 3 317 IPR015943 GO:0005515
Gma01g00500 360 PANTHER MITOTIC CHECKPOINT PROTEIN BUB3.3 7 313 - -
Gma01g00500 360 ProSitePatterns Trp-Asp (WD) repeats signature. 111 125 IPR019775 -
Gma01g00500 360 SUPERFAMILY WD40 repeat-like 15 296 IPR036322 GO:0005515
Gma01g00500 360 PANTHER MRNA EXPORT FACTOR AND BUB3 7 313 - -
Gma01g00500 360 ProSiteProfiles Trp-Asp (WD) repeats profile. 92 125 IPR001680 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma01g00500 Gma-Chr1 7083558 7090527 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma01g00500 K02180 - gmx:100798072 623.239
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma01g00500 01 7083558 7090527 Gma01g00500 01 7083558 7090527 ECH