Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma01g00492 ATGAGGAAGAATGGGTGGCAGCTACCTTATCATCCTCTCCAGGTGGTGGCTATTGCTGTGTTTATGGCTCTGGGGTTTGCCTTCTATGTGTTCTTTGCTCCTTTTGTTGGAAAGAAGATGTATCAGTATGTTGTAATGGGCCTCTACACACCCCTGATTACTTGTGTCTTTGGACTGTACATTTGGTGCGCAGCATCTGATCCTGCAGATCCTGGGGTTTTCAAGTCCAAAAAATATCTTAAAATTCCAGATAGCAAAAAGCTTGATGGACTCAAGAATTCTAAACTAGGAGGGGAATCAACTTCGTCGATGCATGATGGAAATGCTTCAACTGTTGGACCAAAATCGGCTGATAAGGAAGAATTGGGAACTGAAGCAAGTTTTAAAGATGCTTCTATTTTTACTGAGAAGAAAAATGCATCATCACCTTCTTCGTCCTGTCTTCTATTGGTTTGCTCTCCTTGTGCTTATATCTGTGGTTGCTCAAGTTCAAGTAACGAATCTTCTGAACAACAAGCAAGTGAAGATGGCATGTTCTATTGCAGTTTGTGTGAAGTTGAGGTCTTCAAGTATAGCAAGCACTGTAGAGTTTGTGACAAGTGTGTTGATCGCTTTGATCATCATTGCAGGTGGCTGAACAACTGTATTGGGAAAAGGAACTACAGAAAATTTTTCACCCTTATGGTTGCTGCTCTCCTCTTGCTTATTCTTCAGTGGTTGACTGGGATACTTGTGCTTATCTGCTGTTTTGTTGAGAAGAAGAAATTTTCTGTGGATATCTCCTCCAAATTAGGGAGCAGTTTCTCTCTGGTTCCCTTCGTTATTGTGGTGGCAGTTTGCACCATTTTGGCTATGATTGCTACCTTACCCCTTGCTCAGCTGTTTTTCTTTCATATTCTTCTCATTAAAAAGGGAATCACCACATATGATTACATCATAGCTTTGAGGGAGCAGGAGCAGCAAGGTATTGGAGGTCAGCAGAGTCCCCAAATGTCTCCTGTTAGCTCCCTTACTGGAATGAGCAGTGCAAGCTCTTTTACTACATTCCATCGTGGAGCATGGTGCACACCCCCACGTCTGTTCCTTGAAGATCAGTTTGATGTAGTGCCCCCAGAAACAGCTTCTGTAAGCTCGCTGGGAAAGAAGACAATGAGAGATGAGCCGGTTAAGAAAAAGAATACCGGAGCAGTCAAAATCAGTCCATGGACCCTGGCGCGGTTGAATGCAGAAGAGGTTTCCAAGGCTGCTGCAGAAGCAAGAAAAAAATCGAAGATTCTTCAGCCTGTGACAAGACATAATAACGAACCATTCAGGCTGGATCCAGACCACAACTCAGGCAGCAGTGGCCGGCGAATGAGCCCCAGGATCGAGACCAACAGAAGACGGCCCGGTAAACGGATTCGCCTGCCTGCTGACTTGCCTGTGGAGGCCATGCCAAAATTTTCTGCCAGCAACACTGACAAAATTTTCAGTGGAACATCTAGTTTTGCGCTTCTCCAGCTCGAAGCACGAAGTGCATTTCAACCAAGTCAAGCAGTGTCAAGCTCAGCTGGGATTGTTGCTTCCTCTCCTGAAAGCAGTTTAGACTCGCCTGACATTCACCCGTTTCGTGTGTCTACGACCGAAGCCGAAGAAGCAAGAAGGCTTGCTGGTCTTTCTGCTGCCGCCACTGCGAACCTGAAGGGAATCCCTCTGTCAAGGTCAACTAGTGATGGATATGAGGCCTCTGGTGGGGAGGATAGTGACAGGGTTCCCACCAGGATTGTTCAGAGGTCCACAAATTGGACTAATCTGCTCTTCAGTGCTGATCAGGAGGAGAGAGCTTTTGAGACAAAATCATCATCTAGCATGGTTTATAGCAGAAAGTTGTGA 1872 0.4551 MRKNGWQLPYHPLQVVAIAVFMALGFAFYVFFAPFVGKKMYQYVVMGLYTPLITCVFGLYIWCAASDPADPGVFKSKKYLKIPDSKKLDGLKNSKLGGESTSSMHDGNASTVGPKSADKEELGTEASFKDASIFTEKKNASSPSSSCLLLVCSPCAYICGCSSSSNESSEQQASEDGMFYCSLCEVEVFKYSKHCRVCDKCVDRFDHHCRWLNNCIGKRNYRKFFTLMVAALLLLILQWLTGILVLICCFVEKKKFSVDISSKLGSSFSLVPFVIVVAVCTILAMIATLPLAQLFFFHILLIKKGITTYDYIIALREQEQQGIGGQQSPQMSPVSSLTGMSSASSFTTFHRGAWCTPPRLFLEDQFDVVPPETASVSSLGKKTMRDEPVKKKNTGAVKISPWTLARLNAEEVSKAAAEARKKSKILQPVTRHNNEPFRLDPDHNSGSSGRRMSPRIETNRRRPGKRIRLPADLPVEAMPKFSASNTDKIFSGTSSFALLQLEARSAFQPSQAVSSSAGIVASSPESSLDSPDIHPFRVSTTEAEEARRLAGLSAAATANLKGIPLSRSTSDGYEASGGEDSDRVPTRIVQRSTNWTNLLFSADQEERAFETKSSSSMVYSRKL 623
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma01g00492 623 PANTHER S-ACYLTRANSFERASE 8 530 - -
Gma01g00492 623 MobiDBLite consensus disorder prediction 427 461 - -
Gma01g00492 623 MobiDBLite consensus disorder prediction 566 585 - -
Gma01g00492 623 Pfam DHHC palmitoyltransferase 179 312 IPR001594 GO:0016409
Gma01g00492 623 PANTHER ZINC FINGER DHHC DOMAIN CONTAINING PROTEIN 8 530 - -
Gma01g00492 623 ProSiteProfiles DHHC domain profile. 179 229 - -
Gma01g00492 623 MobiDBLite consensus disorder prediction 91 122 - -
Gma01g00492 623 MobiDBLite consensus disorder prediction 95 110 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma01g00492 Gma-Chr1 6827464 6833557 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma01g00492 167 310 Lipid Metabolism Gene Families AT4G22750 28.276 3.41e-10 59.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma01g00492 K20027 - gmx:100803007 1190.64
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma01g00492 01 6827464 6833557 Gma01g00492 01 6827464 6833557 ECH