Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma01g00470 ATGTATTCAAGAGGGAGCGGCGGTTACGGCCAATCGTACACTGGTCAATCCGCATATGGCCAGAACCTGGGTGGCAATTATTCTGGGAGTTCTGTTGGAGGGCATGATGTGGGTCAGCATTCTGTGGCTTCTAGGCATTCAACAATTTTAGGTGGTTCTCAGGACGTTGATGTTGGTGGGTATAGGCCTTCGGCTGCGACCCAGTATGGGGGACAGTATAGTTCTGTTTATGGCTCTGCTGCATTGAGCAGTGCACAGCAGGTCCCTTCATTGAGTACCAAGGGTTCTGCATCATCAGCTTTAGATGGTCGTGGAGGCTATGCTTTGGGTGTCTCTGATTCACCTAAGTTTGCATCTGGAGATTATGTCTCGTCCTCAAGCCATGGATATGGTCACAAATCTGATCAATTGTATGGTGACAAAGGTTTGGAATATTCTGGAATAGATAGGAGACAATATGGTGAACGGCAGAGTGGTTACCTTGGTAGGGACTTAACAAGTGATCCAGCTGGAAGATATGCTGCTGATCCTGTTGGATTTAGTCATCAGCGTCAGCAATCAGAAATTTATGATCGCATTGATCAGGCAGCTTTGCTTCGACAAGAGCAATTGCTGAAAGCTCAGTCTCTGCAAGCTGCATCACTTGATGGGGGTGCTAGACAAGCTGATTATCTTGCAGCAAGGGCTGCTGCTACTCGTCACCCCACCCAAGATCTTGTGTCTTATGGAGGAAGGATGGATTCCGATCCCCGTGCTTCATCCATGCTAAGTGCTACTTCATATAGTGGACAACATGCGCCATCAATATTAGGAGCAGCTCCAAGGAGAAACGTGGATGATCTCTTGTATTCTCAGAATGCTTCAAATCCTGGTTATGGAGTGAGCCTTCCTCCTGGTAGGGACTATGCCAGTGGAAAAGGTCTTCATGGGAATGCCATGGAGTTGGACTATCCTGGAAATGTGCTGCCACATGGTGGGCATACTGATCGCAAAGATGACCGGGCAAGTTATCTACGAGAATTTGAGCTAAGGGAAGAAGAGCGTCGCCGGGAGCGCTTGCGTGAGAGAGAGAGGGACAGAGAAAAAGAGAAAGAACGGGAACGATTGCGAGAGCGAGAACGAGAAAGGGAACGTGAAAGGGATCGCATTATGGAGCGGCGCGAGAAGGAAAGGGAGCGAGAGCGCAAACGTGCACTTGAAACTAAGCCTGAACGAACTCCTGCGAGATCCTCCAAGgatccccgtggtacttcaaaagatccccgtggtacttcaaaagatccccgtggGTCGTCTTTGACAAAGGAGGGGAGATCTACACGACGGGACTCCCCACATCATGGAGCATTACATAGGCACCATTCACCTGTTAAAGAAAAACGGAGAGAATATGTCTGCAAGATATTCCCATCCCGCTTGGTAGATATTGAGAGGGATTACCTCTTATTAGATAAGCGATACCCCCGACTCTTTGTCTCTCCTGAATTCTCCAAGGCTGTTGTGAACTGGCCAAAGGAAAACCATAAACTGTCTATTCATACTCCTGTCAGTTTTGAGCATGACTTTGTTGAAGAAGAAAGTGCCACTGAGCCTAGAGACTCCTCCAACAAGCTTTTGGTGGGACAACCTCCAAATTCATTACAAGGAAATACAGTTTGGAATGCTAAAATAATCTTGATGAATGGACTTAGTAGGTCTGCGTTGGAGGAGCTGTCATCTGATAAAATTGTAGATGATCGCATTCCTCATTTTTGCAATTTCCTTAGATTTGCGGTTCTTAAGAAGGATCATTCTTTCATGGCAGTTGGTGGTCCATGGGAACCTGTTGATGGGGGTGATCCATCTATTGACAATAACTCTTTAATCAAAACTGCCCTCAGATATGCAAAGGATGTTATTCAACTTGACTTGCAGAATTGTCAACATTGGAATCCTTTTCTTGAGTTACATTATGATAGAATTGGCAAAGATGGTTTCTTTAGCCACAAGGAAATCACTGTTCTTTATGTTCCTGATTTGTCTGACTGCCTCCCTTCGTTGGATGAATGGCGTGACAAGTGGCTTGCCCACAAGAAAGCTGTGGCTGAAAAAGAGCGTCAACTTTCTTTGAAAAAAGAGAAATCAAGAGATAACAAGGAAGTATCTAAAGATAAATCAGATAAAAGGAAGGATTCTACTCCATCAGGAAAGTCAGATGTAAAGAAAAAAGAGAAAGATAATAATACTGTTAAGGAAGAAATTGAAGGAAAGACTGGAGTGAATAACAATAAAATCACTAAAAATGAAGGTTCTGACATGGGTGAAGAAGGCAAGAGTGCTGAGAAAAAGACGGGGGTAACTGTCACTGGTCAAACCACAGGTGGTGTGAAGTCTGTGAAAAAGAAGATTATAAAGAGGGTTGTGAAACAGAAAGTTGCCACTAAGGCAAAGGCTACTGCCATCAAACAAACAGACAAATCAGGTGAAAAGGATGTTGCTGAGAAAGTGACATCCAATGTTACTGATCAGGATGGAAAATCTCCTACTGGGGTTGAAACTCCTGTAAAAAACTTAGTTGCTGAGGATATGTCTATTGGGAAAATTGATAGTGAAGAGGGCAAAGATAAAGAAATAAATAGTTCTGAAGATAAACCTCAAAACAAGCCAAATCCAACAGTAAATGCAGTTGTGAGTGATCCTTCTGTGAAAACAACAAAGAAGAAGAAAATTATTAAGCGGGTACCTAAAAAGAAGGTGGTGGGTGAGGCTTCTAAATCTCTTGTATCTGAACCTAAAAAGGATGAGAATCAAGGACAAGATAGTACCCAGAGCTCTGGAAAGCAGACTGCAGATGCAAATACCATAGTGACCGAGGAGAAGAAACCTGGGAAGGTAGTTCCGAAGAAAAAGATAAAAACACCTGTCTCTAAGAAGAAAGATGAAACTGCTGATTCCAATAAAACAGAAACACTGTCTGACAAAAAGGATGAAGGGAACGTTGTGGCAGTTCAAGCACAAGATGACACACAGAGCACTGGCAAGCAGACTGCCAATGCAGATACCACAGTGACACCAGAGGTGAAGAAAACTGGGAAGGTTGTCCCTAAAAAACAATCAAAGACCCCCACGTCTGAAAAGCGAGACAATACAGCTGATTCCAGTAAAACAGAAACAAAGTCTGACAAAGATGACAAAAAGGAAGAAAGAGTTACTGGTGAAAAAAGTGGGGCAAAGACAGACAAGCTGAAAGCCTCTGATAAAGATGTTACCAATGTAAAGGGGAAAGTGAAAGATGGGGACAAGTCAAAAGATGAGAAAGTAACCCAAGAGAGGGATGGAAAGGACGAGTCCAAAAGCAAATCTAGTAAGGAAGTGAAAGACAAGAGGAAGTCTAATGAACCTCCTCGACACCCTGGATTTATTCTTCAAACAAAATGGACCAAAGATTCTAAAATACGTTCTTTGTCATTGTCACTGGATTCATTGCTGGATTATACAGATAAAGATGTTGAAGAATCAAATCTTGAGCTTTCATTGTTTGCTGAATCATTTTATGAAATGCTTCAGTTTCAAATGGGTTCTAGAATTTTGACATTTCTTCAGAAACTGCGCATAAAATTTGTGATCAAAAGAAATCAGAAAAAGAGGCAGAGGGAAGATGAGCAAGAGAAGGATGATGTAAAAAAATCTCCTGTTAAGCGTCAAAAGGGAAATGATCCTTCAGTGAAGAATGAGCCCACAAATATGGACACGTTAAATCCAACCCTACTAGATGATGAGAAAGCTGTTGCTAGGAATGATAACTCTAGTAATAAGGAGGATGATGTGAAGATGGAAGATGGATCAGACGAGGAAGAAGAAGATCCAGAAGAGGATCCTGAAGAGTACGAGGAAATGGAAAATGGTAGTCCCCAGCATGAGGCATCCAATGATAAAAATGCTGAGCAAGAGGCGAATGCAGATACTAAATCTGAAAATATTACTACCAATGATAAAACAGCAGATGAAACTTCTAAAGAGGAGATTAAGGTTAAAGATGAGGTGCAAGAATCCAAGGCCGATCTACAGGTAAAAGAAGAAAAGGAAGGAAAGGATGAGATTAAGAAAGAAACTCCTACTGCTAAGGAGGTTGTTGTGGACAGAGAATTGTTGCAGGCTTTCCGGTTTTTTGATCGCAATCGTGTTGGGTACATCAGGGTTGAAGATATGAGAATAATTATCCATAATCTGGGGATGTTCTTTTCGCACAGGGATGTCAAGGAACTAGTACAGAGTGCATTATTGGAGAGCAACACTGGGAGAGACGACAGAATTCTTTATAATAAGCTAGTGCGGATGAGTGATATTTGA 4329 0.4193 MYSRGSGGYGQSYTGQSAYGQNLGGNYSGSSVGGHDVGQHSVASRHSTILGGSQDVDVGGYRPSAATQYGGQYSSVYGSAALSSAQQVPSLSTKGSASSALDGRGGYALGVSDSPKFASGDYVSSSSHGYGHKSDQLYGDKGLEYSGIDRRQYGERQSGYLGRDLTSDPAGRYAADPVGFSHQRQQSEIYDRIDQAALLRQEQLLKAQSLQAASLDGGARQADYLAARAAATRHPTQDLVSYGGRMDSDPRASSMLSATSYSGQHAPSILGAAPRRNVDDLLYSQNASNPGYGVSLPPGRDYASGKGLHGNAMELDYPGNVLPHGGHTDRKDDRASYLREFELREEERRRERLRERERDREKEKERERLRERERERERERDRIMERREKERERERKRALETKPERTPARSSKDPRGTSKDPRGTSKDPRGSSLTKEGRSTRRDSPHHGALHRHHSPVKEKRREYVCKIFPSRLVDIERDYLLLDKRYPRLFVSPEFSKAVVNWPKENHKLSIHTPVSFEHDFVEEESATEPRDSSNKLLVGQPPNSLQGNTVWNAKIILMNGLSRSALEELSSDKIVDDRIPHFCNFLRFAVLKKDHSFMAVGGPWEPVDGGDPSIDNNSLIKTALRYAKDVIQLDLQNCQHWNPFLELHYDRIGKDGFFSHKEITVLYVPDLSDCLPSLDEWRDKWLAHKKAVAEKERQLSLKKEKSRDNKEVSKDKSDKRKDSTPSGKSDVKKKEKDNNTVKEEIEGKTGVNNNKITKNEGSDMGEEGKSAEKKTGVTVTGQTTGGVKSVKKKIIKRVVKQKVATKAKATAIKQTDKSGEKDVAEKVTSNVTDQDGKSPTGVETPVKNLVAEDMSIGKIDSEEGKDKEINSSEDKPQNKPNPTVNAVVSDPSVKTTKKKKIIKRVPKKKVVGEASKSLVSEPKKDENQGQDSTQSSGKQTADANTIVTEEKKPGKVVPKKKIKTPVSKKKDETADSNKTETLSDKKDEGNVVAVQAQDDTQSTGKQTANADTTVTPEVKKTGKVVPKKQSKTPTSEKRDNTADSSKTETKSDKDDKKEERVTGEKSGAKTDKLKASDKDVTNVKGKVKDGDKSKDEKVTQERDGKDESKSKSSKEVKDKRKSNEPPRHPGFILQTKWTKDSKIRSLSLSLDSLLDYTDKDVEESNLELSLFAESFYEMLQFQMGSRILTFLQKLRIKFVIKRNQKKRQREDEQEKDDVKKSPVKRQKGNDPSVKNEPTNMDTLNPTLLDDEKAVARNDNSSNKEDDVKMEDGSDEEEEDPEEDPEEYEEMENGSPQHEASNDKNAEQEANADTKSENITTNDKTADETSKEEIKVKDEVQESKADLQVKEEKEGKDEIKKETPTAKEVVVDRELLQAFRFFDRNRVGYIRVEDMRIIIHNLGMFFSHRDVKELVQSALLESNTGRDDRILYNKLVRMSDI 1442
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma01g00470 1442 MobiDBLite consensus disorder prediction 1204 1359 - -
Gma01g00470 1442 SUPERFAMILY EF-hand 1374 1419 IPR011992 -
Gma01g00470 1442 MobiDBLite consensus disorder prediction 967 989 - -
Gma01g00470 1442 MobiDBLite consensus disorder prediction 877 894 - -
Gma01g00470 1442 Pfam LAIKA domain 1128 1193 IPR045353 -
Gma01g00470 1442 MobiDBLite consensus disorder prediction 522 541 - -
Gma01g00470 1442 MobiDBLite consensus disorder prediction 345 444 - -
Gma01g00470 1442 MobiDBLite consensus disorder prediction 858 876 - -
Gma01g00470 1442 MobiDBLite consensus disorder prediction 996 1018 - -
Gma01g00470 1442 MobiDBLite consensus disorder prediction 24 46 - -
Gma01g00470 1442 MobiDBLite consensus disorder prediction 747 761 - -
Gma01g00470 1442 MobiDBLite consensus disorder prediction 1292 1312 - -
Gma01g00470 1442 Pfam DBC1 583 700 IPR025954 -
Gma01g00470 1442 MobiDBLite consensus disorder prediction 156 181 - -
Gma01g00470 1442 MobiDBLite consensus disorder prediction 1253 1270 - -
Gma01g00470 1442 Gene3D - 1373 1439 - -
Gma01g00470 1442 MobiDBLite consensus disorder prediction 345 460 - -
Gma01g00470 1442 MobiDBLite consensus disorder prediction 931 948 - -
Gma01g00470 1442 PANTHER CCAR1 HOMOLOG 1 835 - -
Gma01g00470 1442 PANTHER CCAR1 HOMOLOG 972 1441 - -
Gma01g00470 1442 ProSiteProfiles EF-hand calcium-binding domain profile. 1371 1406 IPR002048 GO:0005509
Gma01g00470 1442 MobiDBLite consensus disorder prediction 1032 1128 - -
Gma01g00470 1442 MobiDBLite consensus disorder prediction 1271 1291 - -
Gma01g00470 1442 MobiDBLite consensus disorder prediction 1206 1233 - -
Gma01g00470 1442 MobiDBLite consensus disorder prediction 805 1138 - -
Gma01g00470 1442 SMART DBC1_2 581 706 IPR025954 -
Gma01g00470 1442 MobiDBLite consensus disorder prediction 1321 1359 - -
Gma01g00470 1442 MobiDBLite consensus disorder prediction 698 791 - -
Gma01g00470 1442 Coils Coil 343 389 - -
Gma01g00470 1442 MobiDBLite consensus disorder prediction 815 830 - -
Gma01g00470 1442 PANTHER CELL DIVISION CYCLE AND APOPTOSIS REGULATOR PROTEIN 972 1441 IPR025224 GO:0006355
Gma01g00470 1442 PANTHER CELL DIVISION CYCLE AND APOPTOSIS REGULATOR PROTEIN 1 835 IPR025224 GO:0006355
Gma01g00470 1442 MobiDBLite consensus disorder prediction 698 746 - -
Gma01g00470 1442 Pfam BURAN domain 476 562 IPR045354 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma01g00470 Gma-Chr1 6189629 6199899 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma01g00470 398 817 EF-hand Containing Proteins AT2G03150 51.179 7.51e-120 406
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma01g00470 K25827 - gmx:100784665 2475.28
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma01g00470 01 6189629 6199899 Gma01g00470 01 6189629 6199899 ECH