Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma01g00424 ATGGGCACCACCTTGATGAGATGCTCCCACGCAAACGCTCTCTTCAGAGCTCTCAAACCCAAACCCCGCAATTCTTCACTGCCACTTTCTTCAATGGCCATCAACAAAGGTAATAGTAATAAGGCATATGATGCATTGCTGTTGGATGCTGGGGGCACCCTATTGCAATTGGCAAAGCCAGTTGAGGAGATTTATGCCACTATTGGATCCAAATATGGTGTGACTGTGGATCCAGCTATGATAAAGCAGGGATTTAAGAGAGCATTTGCTGCTCCGTGGCCTGAAAAGCTGCGCTACCAGGGAGATGGGAGGCCATTTTGGAAACTTGTAGTTTCTGAAGCCACTGGTTGTGGAGATGAAGATTATTTTGAGGAAGTTTATGAGTACTATGCAAAAGGTGATGCGTGGCATCTTCCAGATGGAGCTTTTGAAACAATTACTTTTCTCAAGGATGCTGGAGTTAAGATGGCTGTTGTATCTAATTTTGACAACCGCTTAAGGAAGCTATTGAAAGATCTTAATGTTTTAAATCTGTTTGATGCTGTCATTATATCATCAGAGGTTGGATATGAAAAACCAGATCCAAGAATATTCCAAGCTGCTCTTGATGAAGTAAATGTAGAGGCTTGCAAAGCCTTACACATTGGAGATGATCAGAAGGCAGATAAACTGGGGGCCAATGCTGTGGGGATTGATTGTTGGTTATGGGGTATAGATGTGAAGACATTCTCTGATATACAAATTCGAATTCTTAATTCAGAGGCATAA 768 0.4219 MGTTLMRCSHANALFRALKPKPRNSSLPLSSMAINKGNSNKAYDALLLDAGGTLLQLAKPVEEIYATIGSKYGVTVDPAMIKQGFKRAFAAPWPEKLRYQGDGRPFWKLVVSEATGCGDEDYFEEVYEYYAKGDAWHLPDGAFETITFLKDAGVKMAVVSNFDNRLRKLLKDLNVLNLFDAVIISSEVGYEKPDPRIFQAALDEVNVEACKALHIGDDQKADKLGANAVGIDCWLWGIDVKTFSDIQIRILNSEA 255
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma01g00424 255 Gene3D - 59 131 IPR044924 -
Gma01g00424 255 SFLD Haloacid Dehalogenase 43 235 - -
Gma01g00424 255 SUPERFAMILY HAD-like 43 236 IPR036412 -
Gma01g00424 255 PANTHER - 1 254 - -
Gma01g00424 255 PANTHER F14L17.7 PROTEIN 1 254 - -
Gma01g00424 255 SFLD C1.5: HAD, Beta-PGM, Phosphatase Like 43 235 - -
Gma01g00424 255 Gene3D - 47 235 IPR023214 -
Gma01g00424 255 CDD HAD_dREG-2_like 142 252 - -
Gma01g00424 255 TIGRFAM HAD-SF-IA-v1: HAD hydrolase, family IA, variant 1 148 230 IPR006439 -
Gma01g00424 255 Pfam Haloacid dehalogenase-like hydrolase 120 233 IPR041492 -
Gma01g00424 255 PRINTS Haloacid dehalogenase/epoxide hydrolase family signature 43 54 IPR006439 -
Gma01g00424 255 PRINTS Haloacid dehalogenase/epoxide hydrolase family signature 149 162 IPR006439 -
Gma01g00424 255 PRINTS Haloacid dehalogenase/epoxide hydrolase family signature 179 195 IPR006439 -
Gma01g00424 255 PRINTS Haloacid dehalogenase/epoxide hydrolase family signature 197 217 IPR006439 -
Gma01g00424 255 TIGRFAM DREG-2: HAD hydrolase, REG-2-like, family IA 46 235 IPR011949 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma01g00424 Gma-Chr1 5421896 5425520 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma01g00424 - - gmx:100306694 497.664
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma01g00424 01 5421896 5425520 Gma01g00424 01 5421896 5425520 ECH