Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma01g00391 ATGGCGCAAGAACAAGAGTTCAGAACAAGCACCCCACTTCCAAAGTGTGATGCCTATTTCGAAACCATACAATCCAGAAAGAAGCTACCGCTGTCACTGCAGGAGACCTTGACAGATGCATTTGCAAAGATTCCTGTTTCTTCTTTTCCTGCAGTTCCTAGCGGAAAAGTAATTGAAATTCTAGCAGACACACCCGTTGGTGAAGCAGTTAAGATTCTATCTGAAAGCAACATTTTAGCAGCTCCAGTTAAAGACCCAGATGCATCTAATAGTTCAGATTGGAGAAGTAGGTATCTTGGCATCATAGATTATTCAGCCATCATTCTCTGGGTGCTGGAGGGTGCAGAACTTGCACAAGCTGCACTATTGGCAGGTACAGCAACAGCTGCTGGAGTTGGTGCAGGAGCTGCTGGTGCTTTGGGAGCACTAGCATTGGGACTGACAGGTCCTGCAGCAATTGCTGGGCTAACCACTGCTGCAGCAGGTGCTGCACTGGCAGGTGGTGTTGCTGCAGATAAAGTGATGGCTAAAGATGCACCTCAAGCTGCTGATAACCTGGGAGAGGACTTCTACAAAATAATACTGGAAGAAGAACCCTTCAAGTCAACAACGGTGCGATCAATAATTAAATCATACCGATGGGCACCTTTTGTTCCAGTTGCAAGAAACAGTGCTATGCTGACTGTCCTGCTGCTTCTCTCAAAGTATAGGCTGAGGAATGTGCCTGTGATAGAACCAGGTAGACCTGACATTGTAAATTTCATTACTCAATCAGCAGTTGTCCAAGGGCTCGAGGGATGCAAAGGAAGAGATTGGTTTGACTGCATTGCTGAAAAGTGTATATCTGATCTGGGACTTCCATTTATGTCTACCGATGAGGTTATTAGCATCCAGAGCAATGAATTGATTCTTGAAGCTTTCAAGCAGATGAAGGATAATCGAATTGGTGGTCTTCCTGTAATAGAGGGGCCAAAGAAGAGAATTGTTGGAAACTTGAGCATACGAGACATCAGACACTTGCTTCTAAGGCCAGAGCTTTTCACCAATTTTAGGAAGTTGACTGTGATGGATTTCATGAAGAAAATTGTCTCGTCATCCCTTCAAACTGGAAAAGTTACCCAACCCATAACATGCAAGCCTGACTCGACACTACAGGGGGTGATCCATACTCTTGCTTCTCAGTCTATTCACAGGATTTATGTGGTAGATGGACATGATGAAGTAGTTGGAGTCATTACACTAAGAGATGTGATCTCTTGTTTTGTCACCGAACCTCCTTACAATTTTGACGATTACTATGGATTTGCGGTGAAAGAGATGTTGAACCAGTGA 1332 0.4429 MAQEQEFRTSTPLPKCDAYFETIQSRKKLPLSLQETLTDAFAKIPVSSFPAVPSGKVIEILADTPVGEAVKILSESNILAAPVKDPDASNSSDWRSRYLGIIDYSAIILWVLEGAELAQAALLAGTATAAGVGAGAAGALGALALGLTGPAAIAGLTTAAAGAALAGGVAADKVMAKDAPQAADNLGEDFYKIILEEEPFKSTTVRSIIKSYRWAPFVPVARNSAMLTVLLLLSKYRLRNVPVIEPGRPDIVNFITQSAVVQGLEGCKGRDWFDCIAEKCISDLGLPFMSTDEVISIQSNELILEAFKQMKDNRIGGLPVIEGPKKRIVGNLSIRDIRHLLLRPELFTNFRKLTVMDFMKKIVSSSLQTGKVTQPITCKPDSTLQGVIHTLASQSIHRIYVVDGHDEVVGVITLRDVISCFVTEPPYNFDDYYGFAVKEMLNQ 443
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma01g00391 443 ProSiteProfiles CBS domain profile. 51 117 IPR000644 -
Gma01g00391 443 CDD CBS_pair_SF 56 114 - -
Gma01g00391 443 ProSiteProfiles CBS domain profile. 289 347 IPR000644 -
Gma01g00391 443 PANTHER BNAANNG38820D PROTEIN 13 442 - -
Gma01g00391 443 Gene3D - 275 424 IPR046342 -
Gma01g00391 443 SMART cbs_1 374 422 IPR000644 -
Gma01g00391 443 SMART cbs_1 293 342 IPR000644 -
Gma01g00391 443 SMART cbs_1 216 265 IPR000644 -
Gma01g00391 443 SMART cbs_1 56 112 IPR000644 -
Gma01g00391 443 CDD CBS_pair_SF 291 418 - -
Gma01g00391 443 ProSiteProfiles CBS domain profile. 371 431 IPR000644 -
Gma01g00391 443 SUPERFAMILY CBS-domain pair 275 427 IPR046342 -
Gma01g00391 443 Pfam CBS domain 289 342 IPR000644 -
Gma01g00391 443 Pfam CBS domain 373 419 IPR000644 -
Gma01g00391 443 Gene3D - 50 267 IPR046342 -
Gma01g00391 443 PANTHER AMP-ACTIVATED PROTEIN KINASE, GAMMA REGULATORY SUBUNIT 13 442 - -
Gma01g00391 443 SUPERFAMILY CBS-domain pair 37 262 IPR046342 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma01g00391 Gma-Chr1 4805845 4808653 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma01g00391 - - gmx:100800376 767.303
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma01g00391 01 4805845 4808653 Gma01g00391 01 4805845 4808653 ECH