Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma01g00378 ATGGAACTAGAAGCTCCACAAGTTAGCACATGGGAAGGGTATGTGGATTGGAGGAACAAGCCTGCTCTTAGAGGACGCCATGGAGGCATGCTTGCAGCCTCCTTCGTTCTGGTGGCGGAGATATTGGAGAATCTGGCGTTTTTGGCCAATGCTAGCAACTTGGTGTTGTACCTGAGGCATTACATGCACATGTCACCTTCAAAGTCTGCAAATAATGTCACCAATTTCATGGGAACGGCCTTTATTCTTGCCCTCCTCGGTGGTTTCTTATCCGATGCTTTTTTCACCTCTTATCGTGTCTATCTAATAAGTGCAGTTATTGAGTTCCTGGGTCTGATTGTACTCACCATCCAAGCTCGTGATCCTTCATTAAAACCACCAAAGTGTGACTTAGACACCCCATGTCAAGAAGTTAATGATAGCAAAGCAGCAATGTTGTTCATTGGCCTCTATCTGGTGGCTCTAGGGGTTGGAGGAATCAAAGGGTCACTGCCAGCACATGGTGGTGAGCAATTTGATGAAACCACTCCATCTGGGAGGAAGCAGAGATCAACCTTCTTCAACTACTTTGTCTTCTGCCTATCATGTGGTGCCCTTATTGCAGTTACTTTTGTGGTGTGGATTGAAGACAACAAAGGGTGGCAATGGGGTTTTGCAATATCTACTATTAGCATATTTGTGTCTATCCCAGTGTTCTTGGCTGGTTCAGCTACTTACAAGAACAAGATCCCTTCAGGAAGTCCACTTACAACCATTTTAAAGGTTTTGGTTGCTGCTTTACTGAATATCTGCACCTACAAAAACACTAGCAGTGCTGTGGTAAATATGGCTTCAAGCCCTTCTAATCCACACTCAGGTAGAATGGAATCAAAACTAGAAACTGCAAAAGCAAGCACAATAGCTGAAACCCCAACGAGCCACCTCAAGTTTCTCAACAAAGCAGTTACAAACAAGCCAAGGTATTCATCACTAGAATGCACTGTACAGCAAGTAGAAGATGTAAAGGTAGTATTGAAAGTGCTACCCATATTTGGATGCACCATCATCCTCAACTGTTGCCTAGCTCAGTTGTCCACATTCTCTGTTGAACAAGCTGCCACTATGGATACCAAGCTTGGTTCCCTCAAGGTTCCACCGTCTTCGTTACCAGTTTTCCCAGTGGTATTCATCATGATCCTAGCACCAATTTATGACCACATTATCATCCCCTACACAAGGAAAGCAACCAAATCAGAAATGGGAATCACACACCTCCAAAGGATTGGTTTTGGATTAGTGCTCTCCATAGTTGCAATGGCAGTGGCTGCTCTTGTTGAAATCAAAAGGAAAAGAGTGGCCACTCACTCAGGCCTACTTGATTATCCTACCAAACCACTACCTATCACATTCTTGTGGATTGCTTTTCAGTACTTGTTCCTTGGATCTGCTGATCTTTTCACCTTGGCAGGATTGTTGGAATTTTTCTTTTCAGAAGCACCAATAAGGATGAGATCATTGGCCACATCTCTTTCATGGGCCTCTTTGGCAATGGGGTACTACCTAAGTTCAGTGATTGTGTCTATAGTAAACAGTGTCACTGGAAATGGCACCCACAAACCATGGCTATCTGGTGCCAACTTTAACCACTATCACCTAGAGAAGTTCTATTGGCTCATGTGTGTGCTAAGTGGGTTGAACTTCCTACACTACCTGTATTGGGCCACCAGGTACAAATATAGAGGGACAGGTACTACTAGTTAA 1740 0.4397 MELEAPQVSTWEGYVDWRNKPALRGRHGGMLAASFVLVAEILENLAFLANASNLVLYLRHYMHMSPSKSANNVTNFMGTAFILALLGGFLSDAFFTSYRVYLISAVIEFLGLIVLTIQARDPSLKPPKCDLDTPCQEVNDSKAAMLFIGLYLVALGVGGIKGSLPAHGGEQFDETTPSGRKQRSTFFNYFVFCLSCGALIAVTFVVWIEDNKGWQWGFAISTISIFVSIPVFLAGSATYKNKIPSGSPLTTILKVLVAALLNICTYKNTSSAVVNMASSPSNPHSGRMESKLETAKASTIAETPTSHLKFLNKAVTNKPRYSSLECTVQQVEDVKVVLKVLPIFGCTIILNCCLAQLSTFSVEQAATMDTKLGSLKVPPSSLPVFPVVFIMILAPIYDHIIIPYTRKATKSEMGITHLQRIGFGLVLSIVAMAVAALVEIKRKRVATHSGLLDYPTKPLPITFLWIAFQYLFLGSADLFTLAGLLEFFFSEAPIRMRSLATSLSWASLAMGYYLSSVIVSIVNSVTGNGTHKPWLSGANFNHYHLEKFYWLMCVLSGLNFLHYLYWATRYKYRGTGTTS 579
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma01g00378 579 PANTHER PROTEIN NRT1/ PTR FAMILY 4.6 15 575 - -
Gma01g00378 579 SUPERFAMILY MFS general substrate transporter 33 571 IPR036259 -
Gma01g00378 579 PANTHER OLIGOPEPTIDE TRANSPORTER-RELATED 15 575 IPR000109 GO:0016020|GO:0022857|GO:0055085
Gma01g00378 579 Pfam POT family 99 534 IPR000109 GO:0016020|GO:0022857|GO:0055085
Gma01g00378 579 CDD MFS_NPF4 30 569 - -
Gma01g00378 579 Gene3D MFS general substrate transporter like domains 4 576 IPR036259 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma01g00378 Gma-Chr1 4677293 4683810 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma01g00378 1 579 Organic Solute Cotransporters AT1G69850 73.129 0.0 855
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma01g00378 - - gmx:100794723 1131.32
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma01g00378 01 4677293 4683810 Gma01g00378 01 4677293 4683810 ECH