Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma01g00375 ATGCACTTCCTCACCGCACCCTCCTCCCTTTCGCTGCTCTCGCCCCATTTGACCCCTTCCCTCGTCCCCCCTCTCCACTTCCCCGCCTCGACCGGGGGGGTGCGCCGGCTCGCGGTTGAACCCGGTTCGGCTCTCCATTCTTCTCTTCTGAAGGTGAACCGCTACAAGGGTTTGTGGTTGTCCTGCACTGGGTTCTTGCGGCGGTGCAAGGGTTGGAACGGAGAGTTTTCATCTCTTGAGTCGGAGATTTTGGAGTTCATGCAGAGTACCGGTAAGCCCGAAGTGTTTCCGACCAAAGAAGAGTTGGTTGCTGCAGGGAGGGTGGATTTGGTCAACGCTATTGTCAATGAAGGAGGGTGGCTTGCGTATGGGTGGGATTTGAATGGCGGGTCCGGTGAAATTCGGGGTCTTGAAGATAATAGTAGCGGTGGAAATGGAATTGAGGGTAATGGGGCTCAGGCTTCTGGGGTTTCTTCTTCTTCTTCTCAATCAGATAATTCAGTGGACATTGAAGCTGGTGAATCTGGCATTGAGGGTATATTGAGTCGGTTGGAGAAACAAAGAAATAGATCTTTTGGACTTGACTTGGATAATATTTCTTTTGAAAATAATGAAGATAAAGATGAATGGGATCATAGAACTACAACGGATGCAGTAGCTACTGGCCTAGAAAATGGTAGCATAGCATCCTCATCAAGCTCTACAAGCAGTCATCTTAGTGGTTCTCAGATCAAACATGATCCATACGGATCTCAATTAGGTACTGAAAATTTAAGAAACTCGCTTAAGCCAGAGACGTGGAGGAGTTGGATTGTTCAGAGAACTGGTTTTCGGGATACAGATTTTGAAGATGCTGAAATTGTTCCCAGTGAAACTGAGAAAGGAGGCATGAGTGATGCTTCAGGACAACCAGATATCCTCAACAGAAGGGAGTTTTCTTCTGAACATATAAACAGAGAAACGGGTTTATATTCTCTTGATGGAAATACAAATCACAATGACATTAAATCCCGTATCCAGAATCTGGAATCGGAGCTATCTTCTATACTTCACTTGTTGAGGTCTAGCTCGGATAAAATTACAATGCAGATGgtccagaagagctcttctgatggtctagcaaagctttctgatgCTTGGGAATTCCAGGAAAATGAGATCATGAATGCTCAGGGCAGATTGCGTTCTATACGGGCTAAGTTGTCAGTGTTAGAAGGAAAGATGGTGTTGGCAATAATGGATGCACATAAGGTAGTTGAAGAAAATCAGAAGAAGATTAATAATGCTCAAAAAGCTTTGCAAATTCTGAAGACTACTTGTGTAGTTTGGCCTAATAAGGCTTCAGAAGTTCTTTTAACTGGATCATTTGATGGTTGGTCCACCAAGAGAAAGATGGAGAGGTTAAGTCTCGGTGTATTTCTTTTGAACTTGCAGCTGTATCCTGGAAGATATGAGATGAAGTTCATTGTAGATGGAGAATGGAAAATTGATCCATTGCGCCCTGTTGTTACCAGCAATGGCTATGAGAATAATCTTCTCATCGTTCATGATTGA 1554 0.4305 MHFLTAPSSLSLLSPHLTPSLVPPLHFPASTGGVRRLAVEPGSALHSSLLKVNRYKGLWLSCTGFLRRCKGWNGEFSSLESEILEFMQSTGKPEVFPTKEELVAAGRVDLVNAIVNEGGWLAYGWDLNGGSGEIRGLEDNSSGGNGIEGNGAQASGVSSSSSQSDNSVDIEAGESGIEGILSRLEKQRNRSFGLDLDNISFENNEDKDEWDHRTTTDAVATGLENGSIASSSSSTSSHLSGSQIKHDPYGSQLGTENLRNSLKPETWRSWIVQRTGFRDTDFEDAEIVPSETEKGGMSDASGQPDILNRREFSSEHINRETGLYSLDGNTNHNDIKSRIQNLESELSSILHLLRSSSDKITMQMVQKSSSDGLAKLSDAWEFQENEIMNAQGRLRSIRAKLSVLEGKMVLAIMDAHKVVEENQKKINNAQKALQILKTTCVVWPNKASEVLLTGSFDGWSTKRKMERLSLGVFLLNLQLYPGRYEMKFIVDGEWKIDPLRPVVTSNGYENNLLIVHD 517
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma01g00375 517 Coils Coil 419 439 - -
Gma01g00375 517 MobiDBLite consensus disorder prediction 136 169 - -
Gma01g00375 517 PANTHER PROTEIN PTST HOMOLOG 2, CHLOROPLASTIC 2 516 - -
Gma01g00375 517 CDD E_set_AMPKbeta_like_N 438 515 - -
Gma01g00375 517 SUPERFAMILY E set domains 438 516 IPR014756 -
Gma01g00375 517 MobiDBLite consensus disorder prediction 226 257 - -
Gma01g00375 517 PANTHER PROTEIN PTST HOMOLOG 3, CHLOROPLASTIC 2 516 - -
Gma01g00375 517 Pfam Glycogen recognition site of AMP-activated protein kinase 439 516 IPR032640 -
Gma01g00375 517 Gene3D Immunoglobulins 429 517 IPR013783 -
Gma01g00375 517 MobiDBLite consensus disorder prediction 143 169 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma01g00375 Gma-Chr1 4556144 4560876 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma01g00375 - - gmx:100792611 975.311
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma01g00375 01 4556144 4560876 Gma01g00375 01 4556144 4560876 ECH