Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma01g00374 ATGTTGATACTAACATTGACAGCCAGGGTGCCACAATTTCATCCTCCAAGATGCACATCTGACCCTTCTGGCCAGCAAGTGTGTCTTCCCCCAACAACTACTCAATTTGCCATCTTAATACTAGGGTTGTGTTGGATGGCTATAGGCACAGGTGGAATCAAACCATGCACTATTCTCTTTGCCATTGACCAATTTGACACAACTTCCCCTGAAGGAAAGAAAGGTGTAAGCAGCTTCTTTAGTTGGTACTGCGCTACACAAACGTTGTTCCAATTGACCAGTTTGACAATAATAGTTTACATCCAAAACAAAAACTGGGTATTGGGGTTTGGCACACTAGGTGTGCTCATGGTATGTGCAGTTATCCTTTTTTTTCCTGGAACAAAAGTTTATGCTTACATTCCACCAGAGGGAACCATATTTTCTGGTATTGCACCAGTGTTTGTTGCAGCTTGTAAGAAACATCGCCTCCAGAATCCATCAAATGAAGAGAATGCTTACTATGATCCCCTGTTGGAAGATGATGAAACGGTACTGAAGATGCCTTTAACCAAACAACTTAGTTGTTTGAACAAAGCCGCTCTGATACAAGACAATGAACTTGATGCACAAGGTCGAGTCACAAATTCATGGAGGATTTGCAGCATTCAGCAAGTTGAAGAAGTCAAATGCTTGATTAAAATTATGCCAATTTGGGCTTCTGGGATCCTCTGTTTCATACCAATCGCACAACAAAACATCTTTCCTGTATCCCAGGCCACGAAATTGAACCGCCACTTAGGACCCCACTTTGAAATTCCTTCTGCATCATGCAGTGTAGTGTCCTTGATCACCATTGGTATATGGCTCCCATTCTATGAACTCTTTGTGCAACCAGCTCTAGCAAAAATCACCAAACAAAAAGAAGGACTTACAAGCCTTCAAAAGATCATACTTGGTAACATGTTCTCAAATCTCGCAATGGTAACTGCTGGGTTGGTGGAAGGACATAGAAGGGGTGTGGCTATCTCACTTGGTGCACCAATGTTTGCCACATGGCTAGCCCCACAATTCATATTGTTAGGATTTTGTGAAGTATTTACCATTGTTGGACACATTGAATTCTACAACAGTGAATCGCTGGAGAGAATGAGAAGCATAGGTAGCATAGGGAAAACAGATTGGATGAACAATGACATCAACAAAGGAAGATTGGATTACTATTACGTCCTCATAGCGGGATTAGGTGCACTCAATCTCGTCTACCTTATGTTCTGTGCCAAACACTACCGTTACAAGGTCAGTGTCAAAGCTAAAGTGGAGGACACACCATGA 1314 0.4216 MLILTLTARVPQFHPPRCTSDPSGQQVCLPPTTTQFAILILGLCWMAIGTGGIKPCTILFAIDQFDTTSPEGKKGVSSFFSWYCATQTLFQLTSLTIIVYIQNKNWVLGFGTLGVLMVCAVILFFPGTKVYAYIPPEGTIFSGIAPVFVAACKKHRLQNPSNEENAYYDPLLEDDETVLKMPLTKQLSCLNKAALIQDNELDAQGRVTNSWRICSIQQVEEVKCLIKIMPIWASGILCFIPIAQQNIFPVSQATKLNRHLGPHFEIPSASCSVVSLITIGIWLPFYELFVQPALAKITKQKEGLTSLQKIILGNMFSNLAMVTAGLVEGHRRGVAISLGAPMFATWLAPQFILLGFCEVFTIVGHIEFYNSESLERMRSIGSIGKTDWMNNDINKGRLDYYYVLIAGLGALNLVYLMFCAKHYRYKVSVKAKVEDTP 437
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma01g00374 437 PANTHER PEPTIDE/NITRATE TRANSPORTER 1 381 - -
Gma01g00374 437 PANTHER PEPTIDE/NITRATE TRANSPORTER 385 430 - -
Gma01g00374 437 Pfam POT family 1 381 IPR000109 GO:0016020|GO:0022857|GO:0055085
Gma01g00374 437 Gene3D MFS general substrate transporter like domains 1 432 IPR036259 -
Gma01g00374 437 PANTHER OLIGOPEPTIDE TRANSPORTER-RELATED 385 430 IPR000109 GO:0016020|GO:0022857|GO:0055085
Gma01g00374 437 PANTHER OLIGOPEPTIDE TRANSPORTER-RELATED 1 381 IPR000109 GO:0016020|GO:0022857|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma01g00374 Gma-Chr1 4546139 4548208 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma01g00374 1 435 Organic Solute Cotransporters AT1G69870 44.798 3.20e-142 418
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma01g00374 - K14638 gmx:112997804 684.871
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma01g00374 01 4546139 4548208 Gma01g00374 01 4546139 4548208 ECH