Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma01g00362 ATGGATCAGTCACCATTCCTGGCTCAGAGAGGATCTGTGTCATCCAGCCTTGGAAACTCTGCAGAACTTGATGCCAATCTCACACTCAGCGATAAGCTCAAGGTTTTCAAAAGCTCCACCTTTGATCCCAATAACTATGTTGCCTCCAAATCCCGCAGCATGAACGAGAAGGAGATAAGACACTTGTGTGCTTATCTTGTTGATCTGAAGAAGGCTTCGGCAGAAGAAATGCGCAAAAGTGTTCTTGCTAATTACTCAGCCTTCATACGTACATCCAAAGAGATTTCAGATCTTGAGGGAGAGCTGCTTTCCATGAGAAATCTTCTAAACACCCAGGCTGCTTTGGTTCATGGTTTAGCAGAAGGGTGCATGCTTAGTTCCATGATTAGTGGAAATGAAGATTCAGACATGGATGATTTACTAGCTGAAAAAACAGATATATCCAATACAGAAAAATGGCTAATAGGATATTTAGAAACCCTTGAAGTTCTATTAGCAGAGAAAAGAGTGGATGAAGCTATGACTGCATTGGACGAAGGAGAAAAAATGGCAAAAGAAATTAGTGAAGGGAAAACTTTAAGTCCAAGTTTATTCCAGGCATTGCAAGATGCCATTAATGAACACAGAAAAAAACTGGCTGATCAGCTAGCAGAAACTATCTGCCAGCCATCGACTCACAGTGCAGAGATTCGATCAACAGCATTGGCATTGAAAAATCTTGGGGACGGTCCTCGTGCTCATACATTACTACTAAATTCTCACCAAGAAACGTTGCAACGTAACATGAAAAACCTTCAATCCAGCAATTCTGGTGGAGTTGGAGCATTTACTGCTACCCTTTCTCAGCTTGTATTTTCAACCATTTCACAAGCAGCATCAGATTCTTTGTCAGTGTTTGCTGAAGAAGAACCTGCCTATACATCTGAGCTAGTAACTTGGGCAGTAACACAGGCTGAGAAATATGCTGTTCTCCTTAAGAAATGCATTCTTGCCTCTACAGCTGCGGCAGGAGGTTTGAGAGTTGCATCTGAATGTGTTCATGTTTGCATGAGTCACTGTTATCAGCTAGAGGCTAGTGGGCTGGCCCTTTCCCCAATCCTAATAAAATATTTTAGGCCCTTTGTCAAGCAAGCACTGAACACAAATTTGAGAAGAATTGAACAAAGTAGTTCTGCACTAGCTGCTGCAGATGATTGGTTTCTTGCTTATGCACCAACCAGCAGCAGGCATTCTGGCCTACCTCCATCTTCTTCTCACAGTAACTTAAGTTTTCAACCAAAGCTTTCAAGAAGTGCTCACAAATTCAACTCAATGGTTCAGGAGCTATTTGAAGATGTAGGACCTCTTGAAATACTACAATTGGACGTTCTTGCAGTTGAAGGCCTTCTACAAGTGTTCAACTTCTATGTCAATTTGCTAATAAATGCATTGCCAGGTTCAGTGGTAACTGAGAATCTGGAAGGGCACAAAATTGTTAAGATTGCTGAGACCGAAGAACAGCAGATAGCATTGCTGGCTAATGCAATGTTGCTGGCAGATGAGCTTCTCCCGCGTGCTGTCATCAAACTTTCAAATAGCACCAGAGGTGATGACTCTCACAGGAGAGGATCAGACAAACAGCGTGAACTGAAGAAAAGGCTCCAACGTGAAGTTGATCGCCTGCGGGACAGCTTTTGCCGGCAACATGCTCTTGAACTTATCTTCACAGAAGAAGGAGAAGCTCGTCTAAATGCATTAATATATTTGGGAATGGATGGTAATGTAGAACAACCTGAATGGTTTCCTTCTCCAATTTTTCAGGAGATTTTTGCAAAGCTTACGGATGTGGCAAGCATTGCAGCAGATCTGTTTGTGGGAAGGGAAAGATTTGCCACTGTTTTATTGATGAGACTCGCAGAAACAGTGATCCTGTGGCTTTCTGATGATCAAACCTTCTGGGAAGAGGTTGAGACAGGATCAACACCTTTAGGTCCCATCGGCCTTCAACAGCTTTATTTGGATATGCAATTTGTGATGATATTTTCATCCCAAGGCCGTTACTTATCTCGTCATTTGCATCAAGCTATTAAAAACATTATTGAAAGGGCTATTAATGCTGTTGCCGCTACAGGTCTGGATCCCAACAGTGTCTTGCCGGAGGATGAATGGTTTGTTGAAGTTTGCGAAATAGCTATAAAGATGTTAACTGGGAGAGCAGCCTTTGACAACGTAGAGGATGATGTTGCTAGCCCCACTTCATCTGTCCAAACATAA 2253 0.4243 MDQSPFLAQRGSVSSSLGNSAELDANLTLSDKLKVFKSSTFDPNNYVASKSRSMNEKEIRHLCAYLVDLKKASAEEMRKSVLANYSAFIRTSKEISDLEGELLSMRNLLNTQAALVHGLAEGCMLSSMISGNEDSDMDDLLAEKTDISNTEKWLIGYLETLEVLLAEKRVDEAMTALDEGEKMAKEISEGKTLSPSLFQALQDAINEHRKKLADQLAETICQPSTHSAEIRSTALALKNLGDGPRAHTLLLNSHQETLQRNMKNLQSSNSGGVGAFTATLSQLVFSTISQAASDSLSVFAEEEPAYTSELVTWAVTQAEKYAVLLKKCILASTAAAGGLRVASECVHVCMSHCYQLEASGLALSPILIKYFRPFVKQALNTNLRRIEQSSSALAAADDWFLAYAPTSSRHSGLPPSSSHSNLSFQPKLSRSAHKFNSMVQELFEDVGPLEILQLDVLAVEGLLQVFNFYVNLLINALPGSVVTENLEGHKIVKIAETEEQQIALLANAMLLADELLPRAVIKLSNSTRGDDSHRRGSDKQRELKKRLQREVDRLRDSFCRQHALELIFTEEGEARLNALIYLGMDGNVEQPEWFPSPIFQEIFAKLTDVASIAADLFVGRERFATVLLMRLAETVILWLSDDQTFWEEVETGSTPLGPIGLQQLYLDMQFVMIFSSQGRYLSRHLHQAIKNIIERAINAVAATGLDPNSVLPEDEWFVEVCEIAIKMLTGRAAFDNVEDDVASPTSSVQT 750
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma01g00362 750 Pfam Exocyst component 84 C-terminal 152 363 IPR032403 -
Gma01g00362 750 SUPERFAMILY Cullin repeat-like 144 379 IPR016159 -
Gma01g00362 750 Coils Coil 198 218 - -
Gma01g00362 750 PANTHER EXOCYST COMPLEX COMPONENT 8 9 749 IPR033961 GO:0000145|GO:0006887
Gma01g00362 750 PANTHER EXOCYST COMPLEX COMPONENT EXO84A 9 749 - -
Gma01g00362 750 Gene3D - 142 265 IPR042561 -
Gma01g00362 750 Gene3D - 273 377 IPR042560 -
Gma01g00362 750 Coils Coil 537 557 - -
Gma01g00362 750 Pfam Vps51/Vps67 36 114 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma01g00362 Gma-Chr1 4374006 4379552 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma01g00362 K19986 - gmx:100787854 1423.3
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma01g00362 01 4374006 4379552 Gma01g00362 01 4374006 4379552 ECH
Gma01g00362 01 4374006 4379552 Gma02g00229 02 2260633 2266221 GST