Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma01g00344 ATGCTTCCCCTCCGCCTAAGCGCCGTCGTTTCCTCCCTCATTCTCTGCTTCCTCTTCCCGCCACTGCTCTGCCTCGGAATCCGTTCTTTTCCCACCACCGCAGACGACGGCGCGTTCTTCCACTATTCAGAAGCGCCGGAGTACCGAAACGGAGCGGGTTGCCCCGTTTCGTCAACCCGTGTTTCCCTCCCTTCATGCGACCCTTCTCTGGTCCACATCGCCATGACCCTCGACTCCGGCTACCTCCGCGGCTCCATCGCCGCCGTGAACTCCGTCCTCCGCCACTCCTCGTGCCCGGAAAACGTCTTCTTCCACTTCATCGCCGCCGAGTTCGACCCGGCTAGCCCGCGGGTCCTGACCCGACTCGTCGGCTCCATTTTCCCCTCTCTGAACTTCAAAGTTTACATCTTTAGAGAAGACACTGTAATAAACCTAATCTCTTCTTCAATCCGACAAGCCCTAGAAAACCCCTTGAACTACGCGCGCAACTACCTCGGCGACATGCTCGACGCGTGCGTGTCCCGCGTGATCTACCTCGACTCCGACGTCGTCGTTGTCGATGACGTTGGCAAGCTCTGGCGCGCCCCAATCACGCGCGAGCGCGTGATCGCCGCGCCTGAGTACTGTCACGCGAACTTCACCAAGTACTTCACCGACGAGTTCTGGAACGACCCTCTACTTTCGCGCGTGTTCAGCACGCGCAAGCCGTGCTATTTCAACACCGGGGTGATGGTGATGGATTTGGCGAAGTGGAGGGAGGGGAACTACAGGAGGAAAATTGAGAACTGGATGGAGTTGCAGAGGAAGAAGAGGATTTATGAATTGGGTTCTTTGCCACCCTTTTTGCTTGTGTTTGGTGGGAACGTTGAAGCGATTGATCATAGGTGGAACCAGCATGGGCTTGGTGGGGATAATCTTAATGGGGTGTGTAGGTCTTTGCACCCTGGTCCTGTGAGTTTGCTTCATTGGAGTGGGAAAGGGAAACCTTGGGTTAGGCTTGATGAGAAGAAGCCTTGTCCCTTGGATAGTCTTTGGGAGCCTTATGATTTGTATAAACAGGTGAAGGATAGAGTCAGAGATCAGAATTGGGGCTTCTCTTCTTCTATTTTGGTTGGCTATGCTCATGACTTGTTATAA 1137 0.5444 MLPLRLSAVVSSLILCFLFPPLLCLGIRSFPTTADDGAFFHYSEAPEYRNGAGCPVSSTRVSLPSCDPSLVHIAMTLDSGYLRGSIAAVNSVLRHSSCPENVFFHFIAAEFDPASPRVLTRLVGSIFPSLNFKVYIFREDTVINLISSSIRQALENPLNYARNYLGDMLDACVSRVIYLDSDVVVVDDVGKLWRAPITRERVIAAPEYCHANFTKYFTDEFWNDPLLSRVFSTRKPCYFNTGVMVMDLAKWREGNYRRKIENWMELQRKKRIYELGSLPPFLLVFGGNVEAIDHRWNQHGLGGDNLNGVCRSLHPGPVSLLHWSGKGKPWVRLDEKKPCPLDSLWEPYDLYKQVKDRVRDQNWGFSSSILVGYAHDLL 378
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma01g00344 378 PANTHER GALACTURONOSYLTRANSFERASE-LIKE 9-RELATED 8 364 - -
Gma01g00344 378 Pfam Glycosyl transferase family 8 72 332 IPR002495 GO:0016757
Gma01g00344 378 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 72 349 IPR029044 -
Gma01g00344 378 PANTHER GLYCOSYLTRANSFERASE 8 DOMAIN-CONTAINING PROTEIN 8 364 - -
Gma01g00344 378 SUPERFAMILY Nucleotide-diphospho-sugar transferases 71 353 IPR029044 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma01g00344 Gma-Chr1 4080349 4081485 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma01g00344 4 367 Glycosyltransferase AT1G70090 70.449 0.0 546
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma01g00344 - - gmx:100813364 767.303
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma01g00344 01 4080349 4081485 Gma01g00344 01 4080349 4081485 ECH
Gma01g00344 01 4080349 4081485 Gma02g00245 02 2480301 2482143 GST