Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma01g00338 ATGGCTCGCTCTTCTCTCCACGCGCTCTCCACCATTCTCTTCCTACTACGCTTGTTGTTATCTCCTTCCACACACGCCCTTAAACTCCCCTTCCGAGTCAACGATGTTCTCCCCGTTCTCCCCCACGGAATCTCCTGGCCCCTCCTCAACAACCTCCACAGCGCCGTCGACTTGCTCCCTTCCTTCGTCGGCGCCGTCACGCCCGACAACGGTTCCCTTCAGTGGAAGGGCGCCTGCTTTTACGATAATCAAGCCTCCCTCGAGTTCACCGCCCCCGGCGGCGCCGTGCTCCATCTCAAGACAGAAGCTGCACACAGTTGGACCTGCATGGATCTGTATGTTTTTGCAACACCTTATAGGATTACATGGGACTACTATTTCTCTGCGCGAGAACATACTTTGCAGTTTGATTCATGGGAAGAGCCTGCAGAGTTGGAATATGTAAAGCTGCATGGGGTTTCTGTGTTTCTCATGCCATCTGGGATGCTGGGAACGCTCCTTTCTCTAGTTGATGTTTTGCCTCTATTCTCTAACACTGCATGGGGTCAGAATGCCAACTTAGATTTCCTAAAGAAACACATGGGAGCTACATTTGAGAAGCGCAATCAGCCTTGGCGTGCAACTATTGATCCTGCAGATGTTCATTCTGGAGATTTTTTAGCTGTGTCAAAGATCCGTGGTAGGTGGGGAGGTTTTGAGACACTAGAAAAGTGGGTAACTGGTGCATTTGCTGGTCATACAGCAGTTTGCTTGAAGGATGAAATTGGAAATTTATGGGTTGGTGAATCTGGGCATGAGAATGAAAAGGGTGAAGAAATAATAGTGGTAATTCCCTGGCATGAATGGTGGACATTAGCTCTTAAAGATAATTCCAACCCACAGATAGCCTTGCTTCCCCTGCATCCAGAGCTGCGTGCAAGATTCAACTCGACTGCTGCATGGGAATATGCACGGAGCATGTCTGGCAAGCCATATGGTTATCATAATATGATATTCAGTTGGATTGACACAGTAGCTGACAACTATCCTCCACCTCTTGATGCTCACTTGGTAATTTCTGTCATGTCTATGTGGACAAGAATGCAGCCAGCTTATGCTGCAAACATGTGGAATGAAGCGCTGAACAAGCGGTTAGGGACTGAGGATTTGGATTTGCACGACATTCTAATTGAGACTGAGAAGCGTGGGATAGCTTTTGATCAATTACTTACAATTCCTGAACAAGATGAATGGGTATACAGTGATGGGAAATCAACAACATGTGTTGCCTTTATTCTTTCAATGTATAAAGCGGCTGGAATATTCGGCCCTATTTCTAGCTCCATTCAAGTAACTGAATTCACAATTCGTGATGCATACATGCTTAGGATTTTTGAGGATAACCAAACACGTCTACCAAGATGGTGCAACAATGAGAACGATCGGCTTCCATTCTGCCAGATTCTTGGTGAATATAGGATGGAATTGCCTGGCTATAACACCTTGGATCCATATGCCAATATGAACGAGCACTGTCCTTCCCTTCCTCCAACTTATGATAGGCCATTGAAATGTTAG 1557 0.4637 MARSSLHALSTILFLLRLLLSPSTHALKLPFRVNDVLPVLPHGISWPLLNNLHSAVDLLPSFVGAVTPDNGSLQWKGACFYDNQASLEFTAPGGAVLHLKTEAAHSWTCMDLYVFATPYRITWDYYFSAREHTLQFDSWEEPAELEYVKLHGVSVFLMPSGMLGTLLSLVDVLPLFSNTAWGQNANLDFLKKHMGATFEKRNQPWRATIDPADVHSGDFLAVSKIRGRWGGFETLEKWVTGAFAGHTAVCLKDEIGNLWVGESGHENEKGEEIIVVIPWHEWWTLALKDNSNPQIALLPLHPELRARFNSTAAWEYARSMSGKPYGYHNMIFSWIDTVADNYPPPLDAHLVISVMSMWTRMQPAYAANMWNEALNKRLGTEDLDLHDILIETEKRGIAFDQLLTIPEQDEWVYSDGKSTTCVAFILSMYKAAGIFGPISSSIQVTEFTIRDAYMLRIFEDNQTRLPRWCNNENDRLPFCQILGEYRMELPGYNTLDPYANMNEHCPSLPPTYDRPLKC 518
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma01g00338 518 PANTHER OS01G0793500 PROTEIN 10 518 - -
Gma01g00338 518 PANTHER ZINC FINGER MYND DOMAIN PROTEIN 10 518 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma01g00338 Gma-Chr1 4024695 4029294 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma01g00338 - - gmx:100805887 1072
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma01g00338 01 4024695 4029294 Gma01g00338 01 4024695 4029294 ECH