Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma01g00288 ATGGCAGATTCAAAATCAGGATTGAGGAAACCAGTGTTCATCAAGGTTGATCAGCTTCGCCCGGGGACAAGTGGGCACACTTTAACTGTGAAGGTAGTCAATGCTAAGATGGTGATGCAGAGAGGTCGTTCTGATGGTCCTCAATCCCGGCAAATGCAAATTGCTGAGTGCTTGGTTGGTGATGAGACTGGAATGATCATATTCACTGCCAGAAATGATCAAGTGGATACGATGACAGAGGGTGCTACTGTGATCCTGCGTAATGCCAAAATTGACATGTTCAAAGGATCAATGAGGCTTGCTGTGGACAAGTGGGGCCGTGTAGAACTCACAGAACCTGCTAGTTTCACTGTGAAGGAAGATAATAACTTGTCTCTCATTGAGTATGAATTGGTGAATGTTGTTGTGGAATGA 414 0.4493 MADSKSGLRKPVFIKVDQLRPGTSGHTLTVKVVNAKMVMQRGRSDGPQSRQMQIAECLVGDETGMIIFTARNDQVDTMTEGATVILRNAKIDMFKGSMRLAVDKWGRVELTEPASFTVKEDNNLSLIEYELVNVVVE 137
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma01g00288 137 PANTHER EXPRESSED PROTEIN 4 136 - -
Gma01g00288 137 PANTHER OS05G0244600 PROTEIN 4 136 - -
Gma01g00288 137 SUPERFAMILY Nucleic acid-binding proteins 6 135 IPR012340 -
Gma01g00288 137 CDD SoSSB_OBF 27 110 - -
Gma01g00288 137 Gene3D - 23 126 IPR012340 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma01g00288 Gma-Chr1 3249580 3253116 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma01g00288 - - gmx:100499859 269.626
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma01g00288 01 3249580 3253116 Gma01g00288 01 3249580 3253116 ECH
Gma01g00288 01 3249580 3253116 Gma02g00311 02 3258878 3261443 GST