Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma01g00277 ATGTTGGGAGGCAACAATGGAAATCGCTTGCTTCCTGTTTTCTTGGACGAAACTCAATTTCGGCATCAAACTAATGTGTCAAATCAGTTGCAGTTGTTTGGAAATTTACAAGCTGGATGTAGTGTTGACCCAGTTAATTACTTTGGAAATGAGCATATCAGCTCCATGATTCAGCCTAATAAACAAAGCAAGGAAATGGAAGATATATCGAAACAAAGGCTTCAGATTTCCTTAAACTACAATGTTCATCAAGATGATGCTGATCAATTAGCAAGTATTCCAAATCCTAACCCTGTGTCAACAGGATTGAGGCTTTCATATGATGATGATGAGCGTAACTCATCTGTTACTTCTGCAAGTGGCAGCATGTCTGCCACACCGTCTATCATATTGTCTTTTGGTGACAATATCAGAACTGAGCTTGATAGGCAGCAAGAAGAGTTGGACCAGTATGTTAAACTTCAGAAGGAACAACTGTCAAAGGGAGTGAGAGACATGAAGCAAAAGCACGTGGCAGCTCTCCTTACCTCCATTGAGAAAGGTATTAACACAAAGCTTAAGGAAAAAGACGTGGAGATAGAAAACATGAACCGAAAAAACAGGGAGCTGGCAGAAAGAATTAAGCAGGTGGCTGTTGAAGCACAAAGCTGGCATTACAGAGCAAAGTATAATGAGTCAGTTGTCAATACTTTAAGGAACAACCTTCAGCAGGCAATCTCACAAGGAGCTGAACAAGGGAAGGAAGGGTTTGGAGAGAGTGAGGTTGATGATGATGCCTCATATATAGATCCTAATAACTTCCTGAACATTCCGGCCGCACCTATAAACTCTACTCACAAGAGCTACCAAGATATGGAGAATCTGACCTGCAGAGCATGCAAGACAAAGACTGTTTCCATGTTGTTGATGCCTTGTAGGCACCTGTGCTTGTGTAAGGATTGTGAGGGATTTATCAATGTTTGCCCTGTATGCCAATTGATAAAAACTGCTAGTGTTGAGGTATATCTGTCTTAA 1014 0.4112 MLGGNNGNRLLPVFLDETQFRHQTNVSNQLQLFGNLQAGCSVDPVNYFGNEHISSMIQPNKQSKEMEDISKQRLQISLNYNVHQDDADQLASIPNPNPVSTGLRLSYDDDERNSSVTSASGSMSATPSIILSFGDNIRTELDRQQEELDQYVKLQKEQLSKGVRDMKQKHVAALLTSIEKGINTKLKEKDVEIENMNRKNRELAERIKQVAVEAQSWHYRAKYNESVVNTLRNNLQQAISQGAEQGKEGFGESEVDDDASYIDPNNFLNIPAAPINSTHKSYQDMENLTCRACKTKTVSMLLMPCRHLCLCKDCEGFINVCPVCQLIKTASVEVYLS 337
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma01g00277 337 PIRSF SBP1_RNase_bind 1 337 IPR017066 -
Gma01g00277 337 PANTHER SBP (S-RIBONUCLEASE BINDING PROTEIN) FAMILY PROTEIN 4 336 IPR017066 -
Gma01g00277 337 Pfam Zinc finger, C3HC4 type (RING finger) 287 325 - -
Gma01g00277 337 ProSiteProfiles Zinc finger RING-type profile. 290 325 IPR001841 -
Gma01g00277 337 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 272 337 IPR013083 -
Gma01g00277 337 MobiDBLite consensus disorder prediction 88 121 - -
Gma01g00277 337 PANTHER S-RIBONUCLEASE BINDING PROTEIN SBP1-RELATED 4 336 - -
Gma01g00277 337 Coils Coil 186 213 - -
Gma01g00277 337 MobiDBLite consensus disorder prediction 88 102 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma01g00277 Gma-Chr1 3176643 3181409 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma01g00277 284 325 Miscellaneous Gene Families AT4G39050 38.095 4.44e-07 49.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma01g00277 K19042 - gmx:100791550 673.7
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma01g00277 01 3176643 3181409 Gma01g00277 01 3176643 3181409 ECH
Gma01g00277 01 3176643 3181409 Gma02g00320 02 3324600 3329526 GST