Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma01g00270 ATGAAGGCTGAACCCGAAAGAGATAAGAAGAATGGTGACAAACTAAAGTGGTACAAGGTAGAATATGAGGTGCTAAAGAAGAAGCCATCACACACTCTCCCCATTCGTTCCACTCGTTCTTTAGATCTATCCACTCACCTGCCTCTTCCTCACCCCTTTCTCCATCTAACGAGTAAGGAAAAATGGCGCGAGTTGCCGATCAAGTCTGCACAAATTACTGCATCAACTGATTTCACTGAGCTACAAGAGAAGGAACCCTGGCTTTCATCTTCTAAATTGGTTGTGAAACCTGACATGTTATTTGGAAAGCGTGGCAAAAGTGGTTTGGTTGCCTTAAATTTGGATTTTGCACAAGTTGTTTCGTTTGTGAAGGAGCGTCTTGGAAAAGAGGTTGAGATGAGTGGATGCAAAGGACCCATAACAACTTTCATTGTCGAACCTTTCATCCCACACAATGAAGAGTTTTACCTTAACATTGTCTCCGAGAGACTTGGGAACAGCATAAGCTTTTCAGAATGTGGAGGAATTGAAATTGAAGACAACTGGGATAAGGTTAAGACTGCATTTGTTCCAACAGGAGTGTCTCTTACGTCAGAAATTGTTGCCCCACTTGTTGCAACCCTTCCCTTGGAGATCAAGGGAGAAATTGAGGAGTTTCTCAAAGTGGTTTTCACTCTGTTTCAAGACCTGGATTTTACTTTCTTAGAGATGAATCCTTTCACATTGGTTGATGGAAAGCCTTATCCTTTGGATATGAGAGGCGAGCTAGATGACACTGCTGCTTTCAAGAACTTCAAGAAATGGGGAGACATTGAATTTCCACTGCCATTTGGAAGGGTTATGAGTGCCACCGAGTCTTTCATTCATGGATTAGATGAAAAGACAAGTGCATCCTTAAAATTCACAGTGTTGAACCCAAAGGGCCGAATTTGGACAATGGTAGCTGGGGGAGGTGCTAGTGTCATTTATGCTGATACGGTAGGAGATCTTGGCTTTGCATCTGAGCTTGGAAACTATGCTGAATACAGTGGTGCACCCAAAGAAGAGGAGGTCTTGCAGTACGCCAGAGTTGTAATTGATTGTGCAACTGCAAACCCTGATGACCAGAAGAGAGCTCTTGTGATAGGAGGAGGCATAGCCAACTTTACTGATGTTGCTGCCACATTTAGTGGTATAATTCGGGCATTGAAGGAGAAGGAGTCAAAATTGAAAGCAGCAAGGATGCACATCTTTGTGAGGAGAGGGGGTCCCAACTACCAGAAGGGTCTAGCTTTGATGCGAGCGCTTGGAGAGGATATTGGCATCCCCATTGAGGTTTATGGACCTGAAGCCACAATGACTGGTATATGCAAAGAGGCAATACAGTTCATTACTGCTGCCGCTTAA 1386 0.4387 MKAEPERDKKNGDKLKWYKVEYEVLKKKPSHTLPIRSTRSLDLSTHLPLPHPFLHLTSKEKWRELPIKSAQITASTDFTELQEKEPWLSSSKLVVKPDMLFGKRGKSGLVALNLDFAQVVSFVKERLGKEVEMSGCKGPITTFIVEPFIPHNEEFYLNIVSERLGNSISFSECGGIEIEDNWDKVKTAFVPTGVSLTSEIVAPLVATLPLEIKGEIEEFLKVVFTLFQDLDFTFLEMNPFTLVDGKPYPLDMRGELDDTAAFKNFKKWGDIEFPLPFGRVMSATESFIHGLDEKTSASLKFTVLNPKGRIWTMVAGGGASVIYADTVGDLGFASELGNYAEYSGAPKEEEVLQYARVVIDCATANPDDQKRALVIGGGIANFTDVAATFSGIIRALKEKESKLKAARMHIFVRRGGPNYQKGLALMRALGEDIGIPIEVYGPEATMTGICKEAIQFITAAA 461
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma01g00270 461 Gene3D - 54 271 - -
Gma01g00270 461 PANTHER ATP-CITRATE SYNTHASE ALPHA CHAIN PROTEIN 1-RELATED 63 461 - -
Gma01g00270 461 Gene3D - 278 460 IPR016102 -
Gma01g00270 461 SUPERFAMILY Succinyl-CoA synthetase domains 295 441 IPR016102 -
Gma01g00270 461 Pfam ATP-grasp domain 58 241 IPR013650 -
Gma01g00270 461 Pfam ATP citrate lyase citrate-binding 279 455 IPR032263 -
Gma01g00270 461 PANTHER ATP-CITRATE SYNTHASE 63 461 - -
Gma01g00270 461 SUPERFAMILY Glutathione synthetase ATP-binding domain-like 58 274 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma01g00270 Gma-Chr1 3105503 3114175 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma01g00270 63 461 Acyl Lipid Metabolism Gene Families AT1G10670 89.724 0.0 744
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma01g00270 K01648 - gmx:100812287 778.474
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma01g00270 01 3105503 3114175 Gma01g00270 01 3105503 3114175 ECH