Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma01g00269 ATGTCATCGACAGCAGAAGCACCCATCCATGGGGATATCTTAGAGGCCATATTCTCGCACGTGCCACTCATCCACCTTGTGCCGGCCTCTCACGTGTCAAATTCCTGGAAGCGTGCGGTCTCCTCCTCCCTCGCTCACGTCAGACCCATCAAGCCATGGCTCATAGTCCTCACCCAGAGCCTCCGTCACTCGCACGTGACAACTCTCCACGCCTACGACCCCCGCTCGCACGTGTGGCTCCAAATAAAAAACACCGCACGTTCCCACGCTTCCCCCGTGCGATCCTCCCACTCGACGCTGTTCTACGCGCTCACCCCATCCGAGTTCAGCTTCTCCCTCGACGCGCTGCACCTGAAATGGCACTACGCGCCCTCCCCGCGCGTGTGGCGCACCAATCCCGTGGTTGCGCGCGTGGGATCGCGCGTGGTGGTGGCTGGCGGCGCGTGCGAGTTCGAGGACGATCCGCTCGCGGTGGAGATGTACGACGTAAATAGCCAAGCCTGGGAGGCGTGTCCCTCCATGCCGGCGCTGCTGAAAAGCTCGACGGCGTCCTCGTGGCTGTCGGTGGCAGTCGCCGGAGAAATCATGCACGTGACGGAGAAACACTCCGGAGTGACCTACTCGTTCGAAACTATTTCAAAAACGTGGAAAGGACCGTTTAGTTTGAGGCCTCATGAGAGTGTTTTCCACTGTGTCACCGGAACCCTAGGAGAGAGGTTGATGGTGGCGGGGCTGATAGGGAAAGTTGGGAACGTGAAAGGCGTGAAGCTGTGGGAGGTTCGGGTTCGGGGGGGATTAGGTTCGGGGATGGAGGAAGTGGGGGAGATGCCGAAGGAGATGGTTCGGAAGCTATTCAGTGGTTCGGAGTTAGGTTCGGTGGAGGTGACGTGGATTGGGGACTTTGTTTACGTGAGGAACACTTCCGAACCGGAGGAGCTGGTGTTGTGTGAAGTATTGAATCATTTGAATGGGGTTGGGTGCGAGTGGCGGAGTGTACGGAACGCCGCCGTTAGATGCGGTGCGAGGATGGTGTTTTGCGGCGGTAGTGTGTGCATGGAGGATCTGCAGAGGGCGGTGATGTCGGAGAATCCGACATTTTCCATGAAACATGTGTGA 1116 0.5833 MSSTAEAPIHGDILEAIFSHVPLIHLVPASHVSNSWKRAVSSSLAHVRPIKPWLIVLTQSLRHSHVTTLHAYDPRSHVWLQIKNTARSHASPVRSSHSTLFYALTPSEFSFSLDALHLKWHYAPSPRVWRTNPVVARVGSRVVVAGGACEFEDDPLAVEMYDVNSQAWEACPSMPALLKSSTASSWLSVAVAGEIMHVTEKHSGVTYSFETISKTWKGPFSLRPHESVFHCVTGTLGERLMVAGLIGKVGNVKGVKLWEVRVRGGLGSGMEEVGEMPKEMVRKLFSGSELGSVEVTWIGDFVYVRNTSEPEELVLCEVLNHLNGVGCEWRSVRNAAVRCGARMVFCGGSVCMEDLQRAVMSENPTFSMKHV 371
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma01g00269 371 SUPERFAMILY F-box domain 12 51 IPR036047 GO:0005515
Gma01g00269 371 PANTHER F-BOX/KELCH-REPEAT PROTEIN SKIP4 4 359 - -
Gma01g00269 371 Gene3D - 43 263 IPR015915 GO:0005515
Gma01g00269 371 PANTHER KELCH REPEAT-CONTAINING F-BOX-LIKE PROTEIN 4 359 - -
Gma01g00269 371 SUPERFAMILY Kelch motif 52 247 IPR015915 GO:0005515
Gma01g00269 371 Pfam F-box domain 12 44 IPR001810 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma01g00269 Gma-Chr1 3081773 3083082 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma01g00269 - - gmx:100805691 749.584
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma01g00269 01 3081773 3083082 Gma01g00269 01 3081773 3083082 ECH
Gma01g00269 01 3081773 3083082 Gma18g01274 18 21492141 21497542 PCT
Gma18g01274 18 21492141 21497542 Gma01g00269 01 3081773 3083082 PCT