Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma01g00235 atgaagttcatgaaactaggatctcgtcctgatacattctacactgcagaagcAGTAAGGTCAGTCTCTTCTGAAGTTTCTAGTGACCTCATAATTCAAGTTAAGGGAAGTAGATATCTTCTTCACAAGTTTCCCTTGCTGTCAAAATGTTTGAGGCTACAAAAGCTATGTTCAGAATCTCCTGAATCATCTTCTCAGCACCAAATAGTCCAACTCCCTGATTTCCCTGGTGGGGTGGAGGCATTTGAGTTGTGTGCTAAGTTCTGCTATGGAATAAGCATCACTCTCAGCCCTTACAACATTGTGGCGGCACGATGTGGCGCCGAGTATCTTCAGATGACTGAGGAGGTTGAGAAGGGGAACTTAATTCAGAAGCTTGAGGTTTTCTTCAACTCATGCATTCTACGTGGCTGGAAGGATTCTATTGTGAGTCTTCAGACCACAAAGGCGTCGCCTATGTGGTCAGAGGACTTGGGAATTACCAGCAGATGCATTGAAGCTGTTGCTGCAAAAGTTCTAAGTCACCCCTCTAAGGTGAGTTTATCACATAGCCATTCACGAAGGGTGAGGGATGATGTTTCTTGCAATGGCAATGAAAGTGTGAGGCATAATAAGTCAGGAAACAAGGGATGGTGGGCTGAAGATTTGGCAGAACTTAGCATAGACTTGTATTGGAGAACCATGATAGCAATCAAATCTGGTGGTAAGATTCCCTCAAATCTCATCGGAGATGCATTGAAAATCTATGCATCTAGATGGCTACCAAATATTACCAACAATGGAGGACATCTCAAGAAGCAATCTGTTGCTGATTCAGAATCGGACTCGGTTGGTGAAATAGCTTCAAAGCATCGTCTGCTTTTGGAATCAGTGGTGAGCTTGCTTCCTGCTGAGAAAGGTGCTGTTTCTTGTGGCTTTCTTTTGAAGCTCTTGAAGGCATCCAATATTCTTAATGCTTCTTCATCTTCAAAGATGGAATTGGCCAGAAGGGTAGGGCTTCAATTGGAGGAAGCCACAGTGAATGATCTTTTGATACCCTCCCTGTCTTACACAAATGATACAGTGTATGATGTTGAGTTGGTGAGGACCATATTGGAGCAGTTTATGTCACAAGGCCAGAGTCCCCCAACTAGTCCTGCAAGATCTAGGTTTGCCTTTGAAAGAAGAAGGTCTCGTTCAGCTGAGAATATTAACTTGGAGTTCCAAGAGAGTAGGAGGTCCTCTTCAGCATCTCACAGTTCAAAATTGAAAGTGGCAAAGCTTGTGGATAGGTATCTTCAAGAAGTTGCTAGGGATGTGAATTTTCAGTTGTCAAAATTCATTGCTCTTGCTGAGATTATAccagatttcgcaagacacgatcatgatgatctctacagggctattgacatttatctcaagGCTCATCCAGAACTCAACAAGAGTGAAAGGAAAAGATTGTGTCGAATTCTTGACTGCAAAAAACTTTCTATGGAAGCATGCATGCATGCAGCACAGAATGAACTACTTCCCCTAAGGGTTGTTGTTCAAGTTCTCTTCTTTGAGCAAGCTAGAGCAGCACAAGCTGGTGGCAAAGTGACTGATTTGCCAACCAATATCAAGGCATTACTCACAGCACACGGTATTGACCCTTCAAAACCTACAGCACCATTAAGCACTACTACAAGTATACATGCTGAGGACAATTGGAGTGTTTCAAACTTCAAGTCACCAAAGTCGAGGTCTTCAACACTGAGGATGAAGCTAGCTGAAGATGATGACTTCAATCAAAATGGTTTGACCCATGATGGAATTGGAAGGAATTCTAGATTTAAGGCTATTTGCGCTATTCCAACCCAACCCAAAAAAATGCTTAGTAAGTTCTGGTCTACTACCAATAGAACTGCTGCTGCCACTGAAAAGAATTGA 1908 0.402 MKFMKLGSRPDTFYTAEAVRSVSSEVSSDLIIQVKGSRYLLHKFPLLSKCLRLQKLCSESPESSSQHQIVQLPDFPGGVEAFELCAKFCYGISITLSPYNIVAARCGAEYLQMTEEVEKGNLIQKLEVFFNSCILRGWKDSIVSLQTTKASPMWSEDLGITSRCIEAVAAKVLSHPSKVSLSHSHSRRVRDDVSCNGNESVRHNKSGNKGWWAEDLAELSIDLYWRTMIAIKSGGKIPSNLIGDALKIYASRWLPNITNNGGHLKKQSVADSESDSVGEIASKHRLLLESVVSLLPAEKGAVSCGFLLKLLKASNILNASSSSKMELARRVGLQLEEATVNDLLIPSLSYTNDTVYDVELVRTILEQFMSQGQSPPTSPARSRFAFERRRSRSAENINLEFQESRRSSSASHSSKLKVAKLVDRYLQEVARDVNFQLSKFIALAEIIPDFARHDHDDLYRAIDIYLKAHPELNKSERKRLCRILDCKKLSMEACMHAAQNELLPLRVVVQVLFFEQARAAQAGGKVTDLPTNIKALLTAHGIDPSKPTAPLSTTTSIHAEDNWSVSNFKSPKSRSSTLRMKLAEDDDFNQNGLTHDGIGRNSRFKAICAIPTQPKKMLSKFWSTTNRTAAATEKN 635
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma01g00235 635 ProSiteProfiles NPH3 domain profile. 210 518 IPR027356 -
Gma01g00235 635 PANTHER OS12G0117600 PROTEIN 1 634 IPR043454 -
Gma01g00235 635 PANTHER PHOTOTROPIC-RESPONSIVE NPH3 FAMILY PROTEIN 1 634 - -
Gma01g00235 635 Pfam NPH3 family 211 494 IPR027356 -
Gma01g00235 635 SUPERFAMILY POZ domain 21 117 IPR011333 -
Gma01g00235 635 Gene3D Potassium Channel Kv1.1; Chain A 15 123 IPR011333 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma01g00235 Gma-Chr1 2687044 2690274 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma01g00235 26 563 EF-hand Containing Proteins AT3G44820 34.336 3.71e-92 296
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma01g00235 - - gmx:100797361 1184.47
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma01g00235 01 2687044 2690274 Gma01g00235 01 2687044 2690274 ECH