Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma01g00216 ATGATGGAGCTCGGATACCTGAATCAGGGTCAGCCTTCTAGAGGAACAACACCACTTGTCACTCTTCCATTGTTGCTTTCAACACTTGTGTTCTTCTCCACTTTCACACATGCCTTCTCTTCTTCTGTGTTTCCGGAATTGAATCCTATTAAACCTAGGCACTCACGTCTTCTCAGGAGTGCTGTGCAACGAGAAACTCCTACATCTCAGTTGTCTGAACTATGGTCACCTCTGGAAAGCCAAGGATGGAAACCTTATGTTGAATCAAATAAGCCAACAGCATTACCAGAGAAGTCAGAGGGATATATCCAGGTCTTTCTTGATGGAGGTTTGAACCAACAAAAGATGGGGATATGTGATGCAGTTGCTGTTGCAAAGATACTGAATGCTACTCTGGTGATCCCATACCTTGAACTGAATCCTGTATGGCGAGATTCAAGCTCCTTCATGGATATATTTGATGTGGATCATTTCATTGATGTATTGAAGGATGATATTTCTATAGTTAAAGAGTTGCCCAAAGAGTTCGCCTGGAGCACAAGGGAGTATTATGGCTTGGCTATTCGAGAAACCAGAATCAAGGCTGCACCTGTGCATGCATCAGCCTACTGGTATCTGGAGAATGTTTTGCCTGTCCTACAGAGTTATGGTATTGCTGCAATCTCTCCATTTTCTCACCGACTGAGTTTTGACAACTTGCCTGTGGATATTCAACACCTACGTTGTAAAGTAAACTTCCAAGCTTTAACCTTTGTTTCTCATATCAGAACACTTGGAGATGCCCTTATCAGCCGCCTTCGCTATCCTCAAGGCTCAGCTGAAGAAATGGGCTTCAACTACCTTCAAGAGGTCACTGGTGCAGGTGCTAGGAAAAATGCAGGGAAATTTGTTGTTCTACACCTCCGATTTGATAAGGATATGGCAGCCCATTCGGCCTGCGATTTTGGTGGAGGAAAAGCTGAAAAACTGGCCCTTGCAAAGTATAGACAGGTGATTTGGCAAGGGAGGGTTCTTAACTCTCAATTCACTGATGAAGAGTTGAGGAGTCAAGGTCGTTGCCCAATGACTCCTGAAGAGGTTGGATTGTTACTAGCAGCTATGGGATTTGACAACAGCACTCGTTTATATCTTGCCTCTCATAAGGTCTATGGTGGAGAGGCAAGGATTTCAACTTTGAGGGAATTATTTCCTCGAATGGAAGACAAGAAGAGCCTTGCTTCATCTGAAGAGCGTTCTGAGATAAAGGGAAAAGCTTCTCTACTAGCTGCACTTGACTACTATGTTGGCTTGCATAGTGACATATTTATCTCTGCTTCCCCAGGAAACATGCACAATGCATTGGTTGGACACCGGACATACTTGAACTTAAAGACTATAAGGCCAAATATGGCATTGATGGGTCAGCTTTTCCTGAATAAAACCATAGAGTGGTCAGAGTTTCAGGATGCAGTGGTTGAAGGTCACCAAAATAGACAAGGCGAACCAAGGCTGAGGAAGCCAAAACAATCAATATATACATATCCAGCTCCTGATTGCATGTGCCAAGCTTAG 1551 0.4371 MMELGYLNQGQPSRGTTPLVTLPLLLSTLVFFSTFTHAFSSSVFPELNPIKPRHSRLLRSAVQRETPTSQLSELWSPLESQGWKPYVESNKPTALPEKSEGYIQVFLDGGLNQQKMGICDAVAVAKILNATLVIPYLELNPVWRDSSSFMDIFDVDHFIDVLKDDISIVKELPKEFAWSTREYYGLAIRETRIKAAPVHASAYWYLENVLPVLQSYGIAAISPFSHRLSFDNLPVDIQHLRCKVNFQALTFVSHIRTLGDALISRLRYPQGSAEEMGFNYLQEVTGAGARKNAGKFVVLHLRFDKDMAAHSACDFGGGKAEKLALAKYRQVIWQGRVLNSQFTDEELRSQGRCPMTPEEVGLLLAAMGFDNSTRLYLASHKVYGGEARISTLRELFPRMEDKKSLASSEERSEIKGKASLLAALDYYVGLHSDIFISASPGNMHNALVGHRTYLNLKTIRPNMALMGQLFLNKTIEWSEFQDAVVEGHQNRQGEPRLRKPKQSIYTYPAPDCMCQA 516
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma01g00216 516 PANTHER O-FUCOSYLTRANSFERASE 2-RELATED 18 515 - -
Gma01g00216 516 CDD O-FucT_plant 102 459 IPR024709 -
Gma01g00216 516 Pfam GDP-fucose protein O-fucosyltransferase 102 454 IPR019378 -
Gma01g00216 516 PANTHER O-FUCOSYLTRANSFERASE 39 18 515 - -
Gma01g00216 516 PIRSF UCP009360 6 516 IPR024709 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma01g00216 Gma-Chr1 2386160 2391058 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma01g00216 8 515 Miscellaneous Gene Families AT1G22460 32.083 4.86e-89 282
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma01g00216 - - gmx:100801794 1007.67
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma01g00216 01 2386160 2391058 Gma01g00216 01 2386160 2391058 ECH
Gma01g00216 01 2386160 2391058 Gma09g01845 09 44071331 44077190 GST