Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma01g00153 ATGGCCCCTTCATTCGACACAAGTACTCATACGGTATGCGTGATGGATGCTTCGGGCCACTTGGGCTTCAGCCTGGTCCAAAGACTCCTCCAAAGGGGCTACACCGTTCATGCCTCCGTTCAATCATATGGGGAAGAAAACCTTTTCAATGGAATTTCATCTGATCCCGATAAGCTTAGGGTTTTTCGATCTGACCCATTTGATTACCATAGCATAATCGATGCTCTCCGAGGTTGCTCTGGTTTGTTCTACTCATTCGAACCTCCCTTTGACCAACCAAATTATGATGAATACATGGCAGACGTGGAAGTAAGAGCAGCACACAACGTGCTGGAAGCATGTGCTCAGACAGAAACTATAGATAAAGTGATTTTCACTTCCTCAGCTACCGCAGTTGTTTGGAGGGAAGATCGCAAGACCATGGAACTAGATCTAGATGAGAGACATTGGAGTGATGTTAATTTCTGTCGCAAATTCAAGTTATGGCATGGGGTGTCAAAGACAATGGCAGAGAAGAGCGCGTGGGCCTTGGCAATGGACAGAGGAGTGAACATGGTGTCCATCAACGCAGGCTTATTGATGGCGCATGATCTCTCCGTCAAACACCCTTACCTAAGAGGAGCCGCAGAGATGTACGAGGATGGGGTGTTCGTGACCGTTGATTTGGGCTTCTTGGTCGACGCCCACATCTGCGTCTACGAGGATGTCTCATCCTACGGTCGTTATTTGTGTTTCAATCACATTATCAACACCCACGACGACGCCGTTCAGCTCGCCCGCAAGTTGACGCCTGGTGCCTCTTCCTCCTTGCAGCAAAGTGATGACTACGGGAAGAGTTTTATCGAACAGAGAATTAACAACAAGAAGTTGAACAAATTGATGGTGGACTTCGAGGCTTGA 900 0.4789 MAPSFDTSTHTVCVMDASGHLGFSLVQRLLQRGYTVHASVQSYGEENLFNGISSDPDKLRVFRSDPFDYHSIIDALRGCSGLFYSFEPPFDQPNYDEYMADVEVRAAHNVLEACAQTETIDKVIFTSSATAVVWREDRKTMELDLDERHWSDVNFCRKFKLWHGVSKTMAEKSAWALAMDRGVNMVSINAGLLMAHDLSVKHPYLRGAAEMYEDGVFVTVDLGFLVDAHICVYEDVSSYGRYLCFNHIINTHDDAVQLARKLTPGASSSLQQSDDYGKSFIEQRINNKKLNKLMVDFEA 299
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma01g00153 299 Gene3D - 4 299 - -
Gma01g00153 299 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 6 264 IPR036291 -
Gma01g00153 299 CDD FR_SDR_e 12 295 - -
Gma01g00153 299 Pfam 3-beta hydroxysteroid dehydrogenase/isomerase family 14 172 IPR002225 GO:0003854|GO:0006694|GO:0016616
Gma01g00153 299 PANTHER CINNAMOYL-COA REDUCTASE-LIKE SNL6 5 298 - -
Gma01g00153 299 PANTHER NAD DEPENDENT EPIMERASE/DEHYDRATASE 5 298 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma01g00153 Gma-Chr1 1663745 1667022 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma01g00153 12 264 Miscellaneous Gene Families AT5G19440 31.461 8.11e-39 137
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma01g00153 - - gmx:100790333 612.453
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma01g00153 01 1663745 1667022 Gma01g00153 01 1663745 1667022 ECH
Gma01g00153 01 1663745 1667022 Gma09g01908 09 44705394 44708714 GST