Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma01g00152 ATGCAAGCTTCTCTCATCCGAACCGGCTCCGTGCCGGTCCAGAACACGGTTCTCCCCGGTTCACCGCGAGTCTCACTCACGCGCCAAGCCTCCTTCTCCGGCGACAAGAGCCACGCGCATTCTCCCAGGTTTTCAATCCATTCTTCCCACTCCAACAACCGCAGATCCTCGTCGGAGCGCGACGACGAGAATTTCGGCGTTCGCCGGGATCTGAACCGAACCGGATCGCCCTCGTTTTCACCAATCGTACCTCACGAAGAAGACTTCCTCTCCGACGCCGCTCCGCGCAAGCTCGGAATCCGGCCGGAGGATCTACAATTCGGAGAAGGAGACGGTGGATTCCACCGCGGTGCGCCTATCACCGGCGGAAACGGCGGCGAGAGGATGAAAATCGGCGCGTACTACGAGGAAATGTTGAGGTCTAATCCGACGGACGCGCTTCTGCTGAGAAACTACGGCAAATTTCTCCACGAGGTGGAGAAAGACACGGTGAGAGCAGAGGAATTTTACGGAAGAGCGATTCTCGCGAACCCTGGCGATGGCGAATTGCTTTCTCTCTACGGAACGCTTATTTGGGAAACGCAGAGAGACGAAGATAGAGCCAAATCTTACTTTGACCAAGCCATTCACGCCGCTCCTAATGATTGTACGGTGCTGGGATCGTATGCGCACTTCATGTGGGAAGCGGAGGAGGAGGAGGAGGAAGAAGAAGTTAACGGAGGAGCGACGGAGATAACGGCGACGGAGATGATCGTTGCTTTTTAA 765 0.5595 MQASLIRTGSVPVQNTVLPGSPRVSLTRQASFSGDKSHAHSPRFSIHSSHSNNRRSSSERDDENFGVRRDLNRTGSPSFSPIVPHEEDFLSDAAPRKLGIRPEDLQFGEGDGGFHRGAPITGGNGGERMKIGAYYEEMLRSNPTDALLLRNYGKFLHEVEKDTVRAEEFYGRAILANPGDGELLSLYGTLIWETQRDEDRAKSYFDQAIHAAPNDCTVLGSYAHFMWEAEEEEEEEEVNGGATEITATEMIVAF 254
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma01g00152 254 MobiDBLite consensus disorder prediction 1 52 - -
Gma01g00152 254 SUPERFAMILY TPR-like 133 234 IPR011990 GO:0005515
Gma01g00152 254 MobiDBLite consensus disorder prediction 53 69 - -
Gma01g00152 254 PANTHER TETRATRICOPEPTIDE REPEAT PROTEIN 5 1 238 - -
Gma01g00152 254 PANTHER TETRATRICOPEPTIDE REPEAT (TPR)-LIKE SUPERFAMILY PROTEIN 1 238 - -
Gma01g00152 254 MobiDBLite consensus disorder prediction 1 87 - -
Gma01g00152 254 Gene3D Tetratricopeptide repeat domain 124 238 IPR011990 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma01g00152 Gma-Chr1 1651474 1652817 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma01g00152 - - gmx:100788211 481.87
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma01g00152 01 1651474 1652817 Gma01g00152 01 1651474 1652817 ECH
Gma01g00152 01 1651474 1652817 Gma09g01909 09 44718403 44719538 GST