Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma01g00149 ATGGCGGAGGAAAAACGGTTCCGAATAGGGTACGCGCTGTTGCCGAAGAAGCAAAACAGCTTCATCCGAGACTCGCTCGTGAATCTCGCGAGATCTCGCGGGATAGACCTGATCCGGGTCGACCCGAACCGGAGCCTAACGGATCAAGGTCCATTCGATTGCGTCCTCCACAAGCTCTATGACGACGATTGGAAGCGTCAATTAACGGATTTCACCGTTAAGTACCCTAATGTCGTTGTTCTGGACTCGCCGGAATCGATCGAGAGGCTCCACAACCGGATTTTGATGCTGCAGGTGGTGTCGGAGCTGAACGTCGACGACCAGAGCGAGACGTTCGGGATTCTGAAGCAGATTGTGATATACGACAAGGATACACTCTTCGACCGGCGGAACTGGGAGGCGCTGAAGTTTCCGGTGATCGCGAAGCCCTTGGTCGCCGACGGAAGCGCGAAGTCGCACAAGATGGCGTTGGTTTTCAACCATGACGGGTTGAATTCGCTAAAGCCGCCAGTGGTGGTGCAGGAGTTCGTGAACCACGGCGGCGTGATCTTCAAGGTGTACGTCGCCGGCGAGCGCGTGAGGTGCGTGAAGTGGAAGTCCCTGTTGGACGTCGGAGAGGATGAGTTGGTAAGGGCTTCGGAGGACTTGCGGAGGTTTTCGTAG 663 0.5596 MAEEKRFRIGYALLPKKQNSFIRDSLVNLARSRGIDLIRVDPNRSLTDQGPFDCVLHKLYDDDWKRQLTDFTVKYPNVVVLDSPESIERLHNRILMLQVVSELNVDDQSETFGILKQIVIYDKDTLFDRRNWEALKFPVIAKPLVADGSAKSHKMALVFNHDGLNSLKPPVVVQEFVNHGGVIFKVYVAGERVRCVKWKSLLDVGEDELVRASEDLRRFS 220
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma01g00149 220 PANTHER INOSITOL-TETRAKISPHOSPHATE 1-KINASE 1 220 IPR008656 GO:0000287|GO:0005524|GO:0032957|GO:0047325|GO:0052725|GO:0052726
Gma01g00149 220 Gene3D - 117 216 - -
Gma01g00149 220 Gene3D - 1 109 - -
Gma01g00149 220 Pfam Inositol 1,3,4-trisphosphate 5/6-kinase ATP-grasp domain 108 214 IPR040464 -
Gma01g00149 220 SUPERFAMILY Glutathione synthetase ATP-binding domain-like 82 199 - -
Gma01g00149 220 PANTHER INOSITOL-TETRAKISPHOSPHATE 1-KINASE 1 220 - -
Gma01g00149 220 Pfam Inositol 1,3,4-trisphosphate 5/6-kinase pre-ATP-grasp domain 8 87 IPR041429 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma01g00149 Gma-Chr1 1627801 1628463 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma01g00149 K00913 - gmx:100794373 406.371
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma01g00149 01 1627801 1628463 Gma01g00149 01 1627801 1628463 ECH
Gma01g00149 01 1627801 1628463 Gma09g01912 09 44741498 44743155 GST
Gma01g00149 01 1627801 1628463 Gma16g00837 16 14967775 14969301 PCT
Gma16g00837 16 14967775 14969301 Gma01g00149 01 1627801 1628463 PCT