Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma01g00123 ATGAGCACGACCGGTTCTTCGGCTTACCACTGTGTGGCACACCTCCCAAATAATAAGACTATGTTTATGCTCTCTACGCCGCCAACAACCACATTCTTCGCTACGCCTAGGGTTCTTCCGTTTCTCTCTTCAAAACTTTCTTCTTCTTCTTCTTCTTCTACTGCGTCGTCCTCGCCTTGTTGCTCCTCCATCACTCCCAAGGTTAAATCCAAAGATAACAACAATTGCTACCTCGTCTCCGCTAAACATTCTCCCGCTAACATGTCCGCTTCGGTTTCGTCACGCACCTTCCTCAACGCTCGGAACGAACAAGAGCTTCTAGCTGGAATCAGGAAAGAAGTAGAAGCTGGATCTCTGCCTGCTAATGTTGCTGCAGGAATGGAAGAAGTGTACAATAACTATAAAAGTGCAGTTATCCAAAGTGGAGATCCCAAGTCAAAGGAGATTGTATTGTCGAATATGATTGCTTTATTGGATCGCATATTCTTGGATGTGACGGATCCTTTTGTCTTTCAACCACACCACAAAGCAAAGAGAGAGCCTTTTGACTACTACGTGTTTGGTCAGAATTATATCCGTCCTTTAGTTGATTTCAAAAATTCTTATGTTGGCAACATGCCCCTTTTCATTGAAATGGAAGAGAAACTTAAGCAGGGACACAACATCATCTTGATGTCAAATCACCAAACTGAAGCTGATCCAGCCATCATTGCTTTGCTGCTCGAAACACGACTCCCATATATTGCTGAAAACATGACCTATGTAGCAGGAGATAGAGTTATAACTGATCCTCTGTCCAAACCATTCAGTATTGGCAGGAATCTCATTTGTGTTTACTCTAAAAAGCACATGCTTGATGATCCAGCTCTTGTAGAGATGAAAAGAAATGCAAATATACGAGCTCTGAAGGAAATGGCTATGCTTTTAAGGAGTGGATCACAAATAGTCTGGATTGCCCCAAGTGGTGGAAGGGATCGCCCAGATCCCCACACCGGAGAATGGGCACCGGCACCCTTTGATACTTCTTCGGTAGATAATATGAGAAGACTTGTTGAACATTCTGGTCCACCGGGCCATGTATATCCTTTGGCGATATTGTGCCATGATATAATGCCCCCTCCACTAAAGGTTGAGAAAGAAATTGGGGAGAAAAGAATTATATCCTTTCATGGGACTGGCATATCAGTGGCTCCAGCATTAAGCTTTTCTGAAACTACTGCTACTAGTGAAAATCCTGAAAAGGCTAAGGAGGTATTCACAAAAGCCCTGTATGATTCTGTGACGGAGCAATATAATGTGCTGAAATCTGCAATACATGGCAAAAAAGGATTTGAAGCATCAACTCCAGTAGTTTCTTTGTCACAGTCATGGAAGTAG 1377 0.4306 MSTTGSSAYHCVAHLPNNKTMFMLSTPPTTTFFATPRVLPFLSSKLSSSSSSSTASSSPCCSSITPKVKSKDNNNCYLVSAKHSPANMSASVSSRTFLNARNEQELLAGIRKEVEAGSLPANVAAGMEEVYNNYKSAVIQSGDPKSKEIVLSNMIALLDRIFLDVTDPFVFQPHHKAKREPFDYYVFGQNYIRPLVDFKNSYVGNMPLFIEMEEKLKQGHNIILMSNHQTEADPAIIALLLETRLPYIAENMTYVAGDRVITDPLSKPFSIGRNLICVYSKKHMLDDPALVEMKRNANIRALKEMAMLLRSGSQIVWIAPSGGRDRPDPHTGEWAPAPFDTSSVDNMRRLVEHSGPPGHVYPLAILCHDIMPPPLKVEKEIGEKRIISFHGTGISVAPALSFSETTATSENPEKAKEVFTKALYDSVTEQYNVLKSAIHGKKGFEASTPVVSLSQSWK 458
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma01g00123 458 PANTHER GLYCEROL-3-PHOSPHATE ACYLTRANSFERASE, CHLOROPLASTIC 51 458 - -
Gma01g00123 458 PANTHER GLYCEROL-3-PHOSPHATE ACYLTRANSFERASE, CHLOROPLASTIC 51 458 IPR016222 GO:0004366|GO:0006650
Gma01g00123 458 PIRSF G3POAT 2 458 IPR016222 GO:0004366|GO:0006650
Gma01g00123 458 Pfam Acyltransferase 210 365 IPR002123 GO:0016746
Gma01g00123 458 Pfam Glycerol-3-phosphate acyltransferase N-terminal 94 169 IPR023083 GO:0004366
Gma01g00123 458 Gene3D - 92 167 IPR038114 -
Gma01g00123 458 SUPERFAMILY Glycerol-3-phosphate (1)-acyltransferase 94 457 - -
Gma01g00123 458 SMART plsc_2 222 368 IPR002123 GO:0016746
Gma01g00123 458 Gene3D - 168 449 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma01g00123 Gma-Chr1 1397739 1406485 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma01g00123 80 457 Acyl Lipid Metabolism Gene Families AT1G32200 66.667 0.0 554
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma01g00123 K00630 - gmx:100789434 888.641
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma01g00123 01 1397739 1406485 Gma01g00123 01 1397739 1406485 ECH
Gma01g00123 01 1397739 1406485 Gma09g01934 09 44943791 44954483 GST