Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma01g00093 ATGGCAACCCTTGCAGACATTGGGGTCTCAGCTGCCATCAACATTCTCTCAGCCTTTGCCTTCTTGCTGGCTTTTGCTCTTCTGAGAATCCAACCCATCAATGATAGAATCTACTTTCCAAAGTGGTATATCAGTGGAGATAGAAGCAGTCCAAGGAGGTCTGGTGGGAATTTTGTGGGAAAATTTGTGAACCTCAATTTCAGAACTTACCTCACTTTCCTGAACTGGATGCCACAAGCTCTCAGAATGAGTGAGTCTGAGATTATTAGCCATGCTGGCCTTGACTCTGCTGCTTTCCTTAGAATCTATACTCTCGGCTTAAATATTTTTGTTCCAATCACACTTGTGGCACTCCTTGTACTTATACCAGTCAACGTATCAAGTGGGACATTATTTTTCCTAAAAAAGGAATTGGTAGTGAGTGATATTGATAAACTGTCAATATCAAATGTTCCACCTAAGTCTATAAGATTTTTTGTTCACATAGCATTGGAATACCTGTTCACAATATGGATTTGTTTTCTGCTGTACAAAGAATATGATCATATCGCATCAATGAGATTGCATTTCTTGGCCTCACAGCGGAGGCGTGTGGACCAATTCGCAGTAGTTGTCAGGAATATCCCTCATATGTCTGGCCATACAATATCAGATACCGTGGATAGCTTCTTTCAAACAAACCACCCAGAACATTATATAGGACACCAGGCTGTCTACAATGCAAATAAATTTGCTAAATTTGCAAAAAGAAGAGATAGACTCCAAAATTGGCTGGACTATTACCAGCTTAAGTTTGAGAGACATCCTGACAAGAGGCCAACTGTCAAGAATGGATTTTTAGGATTTTGGGGTGGGAAAGTTGATGCTATCGAGTACTACAAACATTCAATTAAGGAACTTGATACGATGATGACAATGGAACGTCAGAAAATTATAAAAGATCCCAAATCTATTTTGCCAGTTGCTTTTCTTTCATTCAAATCCCGATGGGGAGCATCAGTTTGTGCGCAAACCCAACAAAGCAAGAATCCTACACTCTGGCTGACTGATTGGGCCCCAGAGCCACGTGACGTATATTGGCAGAACTTGGCCATACCATTTGTTTCTTTAAACATTCGAAAGCTTATAATATCATTGTCTGTGTTTGCCTTGGTATTCTTCTACATGATTCCCATTGCTTTTGTGCAATCTCTTGCCAATTTGGAGGGTCTTGAAAGAGTTGCTCCTTTCCTCAGACCAGTTATAGAATTGAAATTCATCAAGTCCTTTCTACAAGGTTTTCTTCCTGGTTTGGCCCTTAAAATATTTTTGTACATTCTACCCACAGTTCTAATGATCATGTCAAAAATTGAGGGATATATTGCATTGTCAACACTTGAGCGGAAGACAGCAGCAAAATATTATTATTTTATGCTGGTGAATGTTTTCTTGGGAAGCATAGTGACTGGGACTGCATTTCAGCAACTGCATGCTTTCCTTCACCAGTCACCTACTCAGATTCCTAGAACGATTGGAGTTTCCATTCCAATGAAGGCTACCTTCTTTATGACATACATAATGGTTGATGGATGGGCTGGAATTGCTGGTGAGATTCTCAGATTAAAGCCATTGGTTATATACCATCTCAAAAACATGTTCTTAGTTAAAACCGAAAGAGATAGAGGGAAGGCCATGGACCCTGGGAGTGTGGACTTTCCAGAGACTATTCCAAGTCTTCAACTATACTTCCTTCTTGGAATTGTGTATGCTGTGGTGACACCAATCCTTCTTCCCTTCGTACTAGTCTTCTTTGCCTTTGCATATTTGGTTTACCGTCATCAGATAATCAATGTCTACAACCAACAGTATGAAAGTGCTGCTGCATTTTGGCCACTTGTTCACAGCCGCATTATCGCAAGCTTGCTAATATCCCAGCTTCTTCTGTTGGGTCTTCTTAGCACCAAAAAGGCAGCTAAATCCACACCTTTACTCGTCATATTACCAATATTGACATTTGCATTCCACAAGTTCTGCCAGAGACGTTTTGAGCCAGCATTTAGGAAGTACCCTCTTGAGGAAGCAATGTCAAAGGATTTATTAGAGAAGAGCACAGAACCTGACTTGAACATAGAGGCTTATTTGGCTGATGCTTACTTGCACCCAATCTTCAGGTCATTTGAGGTAGACGACGAATTGGTTGAAGTCAGAGTAGATAATCACCAAACTAATGTAGCTGATTCCCAACCAAGTGAGCCTAGTTCaccatctccaccacatcatgtgcaacaaccatccccaccccatcatatccatgaaccatctccaccTCAATATAGTGAGTATCAAACTTCACCACCAAGTTATTACTACCAATACCATCCTCCATCCCCACCCCATTATGTTTATCAATACTAA 2394 0.3935 MATLADIGVSAAINILSAFAFLLAFALLRIQPINDRIYFPKWYISGDRSSPRRSGGNFVGKFVNLNFRTYLTFLNWMPQALRMSESEIISHAGLDSAAFLRIYTLGLNIFVPITLVALLVLIPVNVSSGTLFFLKKELVVSDIDKLSISNVPPKSIRFFVHIALEYLFTIWICFLLYKEYDHIASMRLHFLASQRRRVDQFAVVVRNIPHMSGHTISDTVDSFFQTNHPEHYIGHQAVYNANKFAKFAKRRDRLQNWLDYYQLKFERHPDKRPTVKNGFLGFWGGKVDAIEYYKHSIKELDTMMTMERQKIIKDPKSILPVAFLSFKSRWGASVCAQTQQSKNPTLWLTDWAPEPRDVYWQNLAIPFVSLNIRKLIISLSVFALVFFYMIPIAFVQSLANLEGLERVAPFLRPVIELKFIKSFLQGFLPGLALKIFLYILPTVLMIMSKIEGYIALSTLERKTAAKYYYFMLVNVFLGSIVTGTAFQQLHAFLHQSPTQIPRTIGVSIPMKATFFMTYIMVDGWAGIAGEILRLKPLVIYHLKNMFLVKTERDRGKAMDPGSVDFPETIPSLQLYFLLGIVYAVVTPILLPFVLVFFAFAYLVYRHQIINVYNQQYESAAAFWPLVHSRIIASLLISQLLLLGLLSTKKAAKSTPLLVILPILTFAFHKFCQRRFEPAFRKYPLEEAMSKDLLEKSTEPDLNIEAYLADAYLHPIFRSFEVDDELVEVRVDNHQTNVADSQPSEPSSPSPPHHVQQPSPPHHIHEPSPPQYSEYQTSPPSYYYQYHPPSPPHYVYQY 797
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma01g00093 797 Pfam Calcium-dependent channel, 7TM region, putative phosphate 373 645 IPR003864 GO:0016020
Gma01g00093 797 Pfam Late exocytosis, associated with Golgi transport 7 179 IPR032880 -
Gma01g00093 797 PANTHER PROBABLE MEMBRANE PROTEIN DUF221-RELATED 2 747 IPR045122 GO:0005227
Gma01g00093 797 MobiDBLite consensus disorder prediction 744 766 - -
Gma01g00093 797 MobiDBLite consensus disorder prediction 736 785 - -
Gma01g00093 797 PANTHER TO DEHYDRATION PROTEIN, PUTATIVE, EXPRESSED-RELATED 2 747 - -
Gma01g00093 797 Pfam Cytosolic domain of 10TM putative phosphate transporter 200 362 IPR027815 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma01g00093 Gma-Chr1 1012075 1019009 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma01g00093 K21989 - gmx:100820282 1400.19
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma01g00093 01 1012075 1019009 Gma01g00093 01 1012075 1019009 ECH
Gma01g00093 01 1012075 1019009 Gma09g01959 09 45221540 45227490 GST