Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi14g1818 ATGGGAGACGCGTTGAATAATTCTAACTCCAGTAAGAGCCCTAAATCAAGCACTCCTATCGCTGGGAAAAAAGCATATAAAAAGTTGCTCGTTGCATCTCGCCCTAAAGGTTTTGTACACAAAAATTATGAACAGCTTGTTTCTCTAACCCATGGTGGCTTTGGAGATAGTACCGTGGGTCATATCACAGTTTTTGTACTTAAAGTTGCTGCATTAGAAACTGTAAGGAGGTTCTCAAAAAGCAGGTGTCCATTTGTATGGAAAGGCCTTCAGGCTCTACAAATCCTTTGTTATCCACCATTTAAATGGATTCAAAGGTGGAAACCCTTTAAGGGTTTGGTCCAAAACATGCAGATCCTATCAAGACCACTACTAGTTCTTTCAATCACAACAGCTTTTTCTGATCAATCTGAATGTAGTGATGGAACTTCAGATTGTCATACTGATTCCCATGATTCAGAAGTACACTCGGAACTATCTTCGGTGCAGACTAATTTGAATACAAGTCATTGCGACACATCTCCCAAAATTTTAGAATCTGAAAATTGGTTGATTCAACTCAACAAAGAGCTGGAAAATCAAGGGATTAGTTTGCCAGAAAGAATCCATGAGGATGAGCTCCGCAGGTTTTATACAGCTTCTAATAATGACTTTTCAAGCTTCCTTACCTCAATCAAGAAGACAATCCGCTGGAGGGAAACTTACAGAATTCTTTCAGGAGAAGAGCTGGAAATATGGTCAAATATGGTGTTCTGGCATGGTTCTGATGTGATGAACAGACCTTGCCTCATTGTGAGGCTTGGGATAGCTTGCAGCACATTGGCATATCAAGATAGACCTCTATTTGCTCAGGCAGTCATATCACAGGTAGAATATGGAGTCTTGCACTTGGTTGATGTAGACAACCCTCAGATTACAGTAGTGGTGGACTGTGAAGGCTTATCTCCTTTGAGAATTCCCATGCAAATGATGAGATCTTGTTCTTCCCTTCTGCAAGATCACTTTCCTAACCTTCTTGGTTGTTTGTTTGTCATACGACTCCCAGCAGTTGTTCGAGTCATCACCCAGACTTTTATTCAGGTTTTGAAGCCTGTTACTAGGAAAAAGTTGAAAATAGAAGGAGAGATGTATCAGAAGGTTCTCTATGACTATCTGCGGACACTGCCATCATATCTTGGAGGCTGCTGCACTTGCATGAAATGTTCTAAAATTGGCCTGTGGGATATGCAGCAACCTTATGCGACTGGGACCAGCAGCAGGATAGATAGGGAGACTGGTATTAGTGACAATGAGGATTCTCCGCCCTCCCATGAATTAGATGGCCGCCTACATGGTAATTATGACCAGTTTTTGAGAACTGCTATCATAAGTATTCTCATATTTTGGGTCTTAATAGCTTTTGTTTCTGGAATATATGATCCCAGCAGTCGTCATTTGTCCTCATGA 1446 0.4122 MGDALNNSNSSKSPKSSTPIAGKKAYKKLLVASRPKGFVHKNYEQLVSLTHGGFGDSTVGHITVFVLKVAALETVRRFSKSRCPFVWKGLQALQILCYPPFKWIQRWKPFKGLVQNMQILSRPLLVLSITTAFSDQSECSDGTSDCHTDSHDSEVHSELSSVQTNLNTSHCDTSPKILESENWLIQLNKELENQGISLPERIHEDELRRFYTASNNDFSSFLTSIKKTIRWRETYRILSGEELEIWSNMVFWHGSDVMNRPCLIVRLGIACSTLAYQDRPLFAQAVISQVEYGVLHLVDVDNPQITVVVDCEGLSPLRIPMQMMRSCSSLLQDHFPNLLGCLFVIRLPAVVRVITQTFIQVLKPVTRKKLKIEGEMYQKVLYDYLRTLPSYLGGCCTCMKCSKIGLWDMQQPYATGTSSRIDRETGISDNEDSPPSHELDGRLHGNYDQFLRTAIISILIFWVLIAFVSGIYDPSSRHLSS 481
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi14g1818 481 MobiDBLite consensus disorder prediction 1 21 - -
Glsi14g1818 481 SUPERFAMILY CRAL/TRIO domain 247 399 IPR036865 -
Glsi14g1818 481 Pfam CRAL/TRIO domain 248 394 IPR001251 -
Glsi14g1818 481 MobiDBLite consensus disorder prediction 417 440 - -
Glsi14g1818 481 MobiDBLite consensus disorder prediction 1 18 - -
Glsi14g1818 481 MobiDBLite consensus disorder prediction 424 440 - -
Glsi14g1818 481 CDD SEC14 241 394 IPR001251 -
Glsi14g1818 481 PANTHER SEC14 CYTOSOLIC FACTOR FAMILY PROTEIN / PHOSPHOGLYCERIDE TRANSFER FAMILY PROTEIN 6 476 - -
Glsi14g1818 481 SMART sec14_4 244 397 IPR001251 -
Glsi14g1818 481 Gene3D - 178 423 IPR036865 -
Glsi14g1818 481 ProSiteProfiles CRAL-TRIO lipid binding domain profile. 252 400 IPR001251 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi14g1818 Glsi-ChrGlsi14 18437485 18442211 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Glsi14g1818 14 18437485 18442211 Glsi04g0219 04 1406608 1411094 CCT
Glsi14g1818 14 18437485 18442211 Glsi14g1818 14 18437485 18442211 ECH