Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi14g1167 ATGGCAGCTATGGCTGCTCTTCAGAGCTCCATGACCTGTCTCTCCCTTTCCTCTAACTCTTTCTTCGGGCAACGCCTTTCACCCATCACTCTCTGCCCTGTTCCGGGCAAATCAACGGAGAAGCCATGCCTTATCGTTATGAAGCTTAAACGATGGGAGCGAAAGGAATGTAAGCCAAATAGCCTTCCAGTGTTGCATAAAATGCATGTTAAAGTTGGAGATACAATTAAAGTAATATCTGGACATGAAAAAGGTAAAATTGGAGAGATTACCAAGGTCTTCAGGCATAACAGCACTGTCATAGTGAAAGAAATAAATTTGAAGACAAAGCATGTGAAGAGTAGAGAAGAGGGTGAACCAGGGCAAATTATTAAGATCGAAGCTCCTATCCACAGCTCAAATGTGATGCTTTACTCAAAAGAACAGAATGTGGCAAGCCGTGTGGGCCATAAAATTCTTGAAAATGGTGATAGAGTCCGTTACCTAATAAAAACCGGTGAGATAATTGATAGTGCAGAGAATTGGAAGAAATTGAAGGAAGAGGATAAAAAAACTGAAGAAGTTGCTACTACGTGA 576 0.4132 MAAMAALQSSMTCLSLSSNSFFGQRLSPITLCPVPGKSTEKPCLIVMKLKRWERKECKPNSLPVLHKMHVKVGDTIKVISGHEKGKIGEITKVFRHNSTVIVKEINLKTKHVKSREEGEPGQIIKIEAPIHSSNVMLYSKEQNVASRVGHKILENGDRVRYLIKTGEIIDSAENWKKLKEEDKKTEEVATT 191
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi14g1167 191 PANTHER MITOCHONDRIAL RIBOSOMAL PROTEIN L24 2 187 IPR003256 GO:0003735|GO:0005840|GO:0006412
Glsi14g1167 191 SUPERFAMILY Translation proteins SH3-like domain 66 168 IPR008991 -
Glsi14g1167 191 Hamap 50S ribosomal protein L24 [rplX]. 68 164 IPR003256 GO:0003735|GO:0005840|GO:0006412
Glsi14g1167 191 ProSitePatterns Ribosomal protein L24 signature. 73 90 IPR005825 GO:0003735|GO:0005840|GO:0006412
Glsi14g1167 191 SMART kow_9 69 96 IPR005824 -
Glsi14g1167 191 Pfam KOW motif 72 103 IPR005824 -
Glsi14g1167 191 NCBIfam 50S ribosomal protein L24 67 169 IPR003256 GO:0003735|GO:0005840|GO:0006412
Glsi14g1167 191 CDD KOW_RPL26 73 137 IPR041988 GO:0003723
Glsi14g1167 191 Gene3D - 63 168 IPR014722 -
Glsi14g1167 191 Pfam Ribosomal proteins 50S L24/mitochondrial 39S L24 105 169 IPR003256 GO:0003735|GO:0005840|GO:0006412
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi14g1167 Glsi-ChrGlsi14 12874702 12877157 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Glsi14g1167 14 12874702 12877157 Glsi14g1167 14 12874702 12877157 ECH