Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi14g1078 ATGACGAAGAAGAAGGAAAAGAAGGTGAATGTATCCGGAAAGCCAAAGCACTCGCTTGATGTGAATAGGAGCAATGACAAGAGCACGCAGAACTCGCGTAGCGCCGCCACTGTGCGGCGCCTTAAGATGTACAATACGAGACCCGTGCGGGATCGCAAAGGGAAGGTTTTGAAGAATGAGCTTCAATCGAAGGACTTGCCAAATACGCGAATTCAACCCGGCCGCCGATGGTTTGGAAACACTCGAGTTGTAAATCAAAAGGAGCTTGAATTTTTCCGAGAAGAGCTCCAAAGCCGCATGTCAAGTAATTATAATGTCATATTGAAAGAGAAGAAATTACCCTTGTCGCTCTTGAATGATCACCAGAAGCAAGCGAGAGTTCACCTTCTTGATAGAGAGCCTTTTGAGGATGCGTTTGGACCTAAGACAAAAAGGAAGCGCCCAAACCTTTTGGCAGCAGATTATGAATCCTTAGTTAAGAAAGCTGATGGTTCTCATGAAGCTTTTGAACAGAAGTATGGTGCTAGGGTATCTGCAGAAGGTAATGATGAAGGAGAATTTAGGGATTTAGTGAGGCATACAATGTTTGAAAAAGGTCAAAGTAAACGGATATGGGGTGAGCTCTACAAAGTGATAGATTCTTCTGATGTTGTCGTCCAGGTTTTAGATGCAAGGGACCCGCAAGGCACAAGATGTTACCATTTAGAGAAGCATTTGAAGGAAAATTGCAAGCACAAGCACATGGTTCTTTTGTTAAACAAGTGCGATTTAATTCCTGCTTGGGCAACCAAAGGGTGGCTTAGAGTTTTGTCAAAAGAATATCCAACTCTAGCTTTCCACGCAAGCATCAACAAGTCCTTTGGAAAGGGTTCACTTCTGTCGGTTTTGAGACAATTTGCCCGATTGAAAAGTGACAAGCAAGCAATATCTGTGGGATTTATTGGATATCCAAATGTCGGGAAGTCTTCAGTGATAAACACATTACGTACCAAGAATGTCTGCAAGGTTGCTCCAATTCCGGGGGAAACAAAAGTCTGGCAGTATATAACTCTTACAAAGAGGATCTTTTTAATTGACTGTCCAGGAGTTGTTTACCACAACAATGATTCTGAAACAGACATTGTGCTGAAGGGCGTAGTACGTGTGACAAACTTGCATGATGCTACAGAACATATAGGTGAAGTTTTGAAACGTGTGAAGAAGGAGCATTTGGAAAGAGCGTATAAGATAAAAGAGTGGGATGATGAAAATGACTTCCTAATTCAGCTTTGCAAATCAACTGGCAAACTCTTGAAGGGTGGTGAGCCTGACCTGATGACTGCAGCGAAGATGGTACTTCATGACTGGCAGAGGGGTAGAATTCCCTTTTTTGTTCCCCCTCCACGGAAGGATGACTCATCTGAGGAACCCAATGTTAATGGTGTTGATGTCGATGCTGCAGTTGACAGCAATCAGGCATCTGCAGCTTTTAAAGCTATAGCAAATGTTCTTTCATCCCAGCAACAAAGAAGTGTACCTGTTCAGAGGGATTTATATAGCGAGATTGAGTTGAAGGGAGAGACAACGGACCAACTTCCAAACACTGGGGATAATATATGCGAAGAGATTCTGACCCCTAATAGAGACATATCTGAGCAGGATCCAGCCACTGAGATTCCATCCGAGCCACTTGTCTATGCTGAGAGCTTGAATGCTGAGCTGGTTCCAACAAATTCATAA 1719 0.4328 MTKKKEKKVNVSGKPKHSLDVNRSNDKSTQNSRSAATVRRLKMYNTRPVRDRKGKVLKNELQSKDLPNTRIQPGRRWFGNTRVVNQKELEFFREELQSRMSSNYNVILKEKKLPLSLLNDHQKQARVHLLDREPFEDAFGPKTKRKRPNLLAADYESLVKKADGSHEAFEQKYGARVSAEGNDEGEFRDLVRHTMFEKGQSKRIWGELYKVIDSSDVVVQVLDARDPQGTRCYHLEKHLKENCKHKHMVLLLNKCDLIPAWATKGWLRVLSKEYPTLAFHASINKSFGKGSLLSVLRQFARLKSDKQAISVGFIGYPNVGKSSVINTLRTKNVCKVAPIPGETKVWQYITLTKRIFLIDCPGVVYHNNDSETDIVLKGVVRVTNLHDATEHIGEVLKRVKKEHLERAYKIKEWDDENDFLIQLCKSTGKLLKGGEPDLMTAAKMVLHDWQRGRIPFFVPPPRKDDSSEEPNVNGVDVDAAVDSNQASAAFKAIANVLSSQQQRSVPVQRDLYSEIELKGETTDQLPNTGDNICEEILTPNRDISEQDPATEIPSEPLVYAESLNAELVPTNS 572
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi14g1078 572 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 201 439 IPR027417 -
Glsi14g1078 572 ProSiteProfiles Circularly permuted (CP)-type guanine nucleotide-binding (G) domain profile. 205 366 IPR030378 GO:0005525
Glsi14g1078 572 Pfam NGP1NT (NUC091) domain 43 167 IPR012971 -
Glsi14g1078 572 MobiDBLite consensus disorder prediction 539 558 - -
Glsi14g1078 572 FunFam Nuclear/nucleolar GTPase 2 204 366 - -
Glsi14g1078 572 CDD NGP_1 207 363 IPR024929 GO:0005730
Glsi14g1078 572 Gene3D - 195 365 IPR027417 -
Glsi14g1078 572 FunFam Nucleolar GTP-binding protein 2 368 458 - -
Glsi14g1078 572 PRINTS GTP1/OBG GTP-binding protein family signature 357 372 IPR006073 GO:0005525
Glsi14g1078 572 PRINTS GTP1/OBG GTP-binding protein family signature 311 331 IPR006073 GO:0005525
Glsi14g1078 572 MobiDBLite consensus disorder prediction 1 36 - -
Glsi14g1078 572 MobiDBLite consensus disorder prediction 1 23 - -
Glsi14g1078 572 Gene3D - 366 458 IPR023179 -
Glsi14g1078 572 PANTHER GTP-BINDING PROTEIN-RELATED 27 494 - -
Glsi14g1078 572 Pfam 50S ribosome-binding GTPase 311 399 IPR006073 GO:0005525
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi14g1078 Glsi-ChrGlsi14 11831819 11838210 Dispersed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Glsi14g1078 14 11831819 11838210 Glsi14g1078 14 11831819 11838210 ECH