Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi14g1077 ATGGATCGGCTGCTAAAAGCTGCAAGAGCGTCTGGTTCTCTCAACCTCTCTAATCGCTCGCTCAGGGAAGTTCCCAATGAGGTGTACCGGAATCTGGACGGAGTTGGGGAGGATGATAAGTGGTGGGAGGCTGTGGAGCTCCAGAAGCTCATTTTGGCTCATAATGATATTGAATCATTAAAGGAAGATCTGAGAAATTTATCTTTACTGACTGTGCTGAATGTTAACCACAACAGACTTTCTGAGCTTCCGGCTGCAATAGGAGAGCTATCTCAGCTAAAGTTGCTAGACGTGTCATTCAATTTGATACATAAAATACCAGAGGAAATTGGATCAGCAGCATCACTTGTTAAGTTTGATTGCTCAAACAATCAACTCAAGGAGCTTCCAAACTCACTTGGAAGATGTTTAGAATTGTCAGAATTGAAGGGATCAAACAACCTCATTACCAGCTTGCCAGAGGATTTAGCAAATTGTTCGAAATTGACAAAGCTAGATATGGAGGGAAACAAGCTAACATTGATATGTGAAAATCTCATTTCATCATGGACCGTGCTTACTGAATTGAATGCATCAAAAAATTTGCTGACTGGCATACCAGTCAGCATTGGAGGCCTTTCCCGTCTAATTCGTCTTGACCTCCATCAGAACAGAATCTCATCAATCCCATCATCAATTGCGGGTTGTCATTCACTTGCAGAGTTTTATTTGGGGAATAACAACCTTTCTACAGTACCGGTGGAGATAGGGGCCCTTTCACGTCTAGGGACTTTAGATCTTCACTCTAACCAGCTGAAGGAGTATCCAGTAGAGGCATGCAAATTAATTCTGTCAGTCCTGGATCTTTCAAACAATTCGTTGAGTGGGTTAGCCCCTGAAATGGGCAAGATGACTACCCTGAGGAAACTTCTGCTTACGGGAAATCCTTTGCGGACTCTTCGAAGCTCATTAGTAAGTGGACCTACAGCAGCATTACTGAAATTTCTTCGAAGTAGACTTTCTGAAGGTGAAGATTCTGAATCTACAATCACAGCAAAAGAGGATGTAATTGTAAAGGCTTCTAGATTGTCTATCACTTCCAAGGAACTTTCTCTGGAAGGGCTGGGGTTGAGTGCTGTTCCATCAGAAGTATGGGAATCAGAGGAGGTTGTAAAACTTGATCTTTCTAGAAATTCCATCCAGGAGTTACCGGTGGAGCTTTCTTCTTGTGTTTCCCTCCAGACAATGATTTTATCTAGGAATAGAATCAAAGACTGGCCAGGTTCAATTCTTAAATCATTTTCAAGTCTTTCCTGTTTGAAGCTGGACAACAATCCCCTCAGACAGATTCCTTCTGATGGTTTTGAAGCAGTGCCTATGCTTCAGATTCTTGATCTGAGCGGGAATGCAGCTTCATTACTGGATGGTCCTGCATTTTCTAGTTTGCCACATCTGCAAGAGCTTTACCTGAGAAGAATGCAGATCAGTGAAGTCCCATCAGATATATTGAGGCTGCTTCAACTGCGAATCCTTGACTTGAGTCAAAATTCCCTTCAATCAATTCCAGCGGGGTTTAAAAATCTCACTTCTCTCATGGAGCTCGACATATCTGATAACAACATCTCAGCCCTTCCTTCTGAGCTGGGGTTGCTGGAACCAAGCCTTCAGGCGTTGCGACTTGATGGAAATCCACTCAGAAGCATTCGAAGGACTGTCTTGGATAAAGGAACTAAAGCTGTTCTGAAATATTTGAAGGACAAATTGCCAGAGCACTAGCAAAAAGGAGATAAAGATCGGCACCGAAAAGCAAGTTTATTTCACTTTTCTTTTGGTAAAGGTCCGCATTTATCTTCGATTTTACGGTAA 1845 0.4249 MDRLLKAARASGSLNLSNRSLREVPNEVYRNLDGVGEDDKWWEAVELQKLILAHNDIESLKEDLRNLSLLTVLNVNHNRLSELPAAIGELSQLKLLDVSFNLIHKIPEEIGSAASLVKFDCSNNQLKELPNSLGRCLELSELKGSNNLITSLPEDLANCSKLTKLDMEGNKLTLICENLISSWTVLTELNASKNLLTGIPVSIGGLSRLIRLDLHQNRISSIPSSIAGCHSLAEFYLGNNNLSTVPVEIGALSRLGTLDLHSNQLKEYPVEACKLILSVLDLSNNSLSGLAPEMGKMTTLRKLLLTGNPLRTLRSSLVSGPTAALLKFLRSRLSEGEDSESTITAKEDVIVKASRLSITSKELSLEGLGLSAVPSEVWESEEVVKLDLSRNSIQELPVELSSCVSLQTMILSRNRIKDWPGSILKSFSSLSCLKLDNNPLRQIPSDGFEAVPMLQILDLSGNAASLLDGPAFSSLPHLQELYLRRMQISEVPSDILRLLQLRILDLSQNSLQSIPAGFKNLTSLMELDISDNNISALPSELGLLEPSLQALRLDGNPLRSIRRTVLDKGTKAVLKYLKDKLPEHXQKGDKDRHRKASLFHFSFGKGPHLSSILR 614
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi14g1077 614 SMART LRR_bac_2 521 540 - -
Glsi14g1077 614 SMART LRR_bac_2 498 517 - -
Glsi14g1077 614 SMART LRR_bac_2 113 132 - -
Glsi14g1077 614 SMART LRR_bac_2 67 86 - -
Glsi14g1077 614 SMART LRR_bac_2 206 225 - -
Glsi14g1077 614 SMART LRR_bac_2 90 109 - -
Glsi14g1077 614 SMART LRR_bac_2 186 202 - -
Glsi14g1077 614 SMART LRR_bac_2 136 155 - -
Glsi14g1077 614 SMART LRR_bac_2 229 248 - -
Glsi14g1077 614 SMART LRR_bac_2 159 178 - -
Glsi14g1077 614 ProSiteProfiles Leucine-rich repeat profile. 523 544 IPR001611 GO:0005515
Glsi14g1077 614 PANTHER - 145 312 - -
Glsi14g1077 614 FunFam Leucine-rich repeat-containing protein 40 472 580 - -
Glsi14g1077 614 PRINTS Leucine-rich repeat signature 498 511 - -
Glsi14g1077 614 PRINTS Leucine-rich repeat signature 277 290 - -
Glsi14g1077 614 Gene3D Ribonuclease Inhibitor 177 272 IPR032675 -
Glsi14g1077 614 Gene3D Ribonuclease Inhibitor 273 332 IPR032675 -
Glsi14g1077 614 Gene3D Ribonuclease Inhibitor 333 467 IPR032675 -
Glsi14g1077 614 Gene3D Ribonuclease Inhibitor 468 580 IPR032675 -
Glsi14g1077 614 ProSiteProfiles Leucine-rich repeat profile. 46 68 IPR001611 GO:0005515
Glsi14g1077 614 SMART LRR_typ_2 90 113 IPR003591 -
Glsi14g1077 614 SMART LRR_typ_2 498 520 IPR003591 -
Glsi14g1077 614 SMART LRR_typ_2 546 568 IPR003591 -
Glsi14g1077 614 SMART LRR_typ_2 252 275 IPR003591 -
Glsi14g1077 614 SMART LRR_typ_2 521 544 IPR003591 -
Glsi14g1077 614 SMART LRR_typ_2 159 182 IPR003591 -
Glsi14g1077 614 SMART LRR_typ_2 114 136 IPR003591 -
Glsi14g1077 614 SMART LRR_typ_2 297 320 IPR003591 -
Glsi14g1077 614 SMART LRR_typ_2 277 296 IPR003591 -
Glsi14g1077 614 SMART LRR_typ_2 427 450 IPR003591 -
Glsi14g1077 614 SMART LRR_typ_2 451 474 IPR003591 -
Glsi14g1077 614 SMART LRR_typ_2 381 403 IPR003591 -
Glsi14g1077 614 SMART LRR_typ_2 475 497 IPR003591 -
Glsi14g1077 614 SMART LRR_typ_2 67 88 IPR003591 -
Glsi14g1077 614 SMART LRR_typ_2 45 66 IPR003591 -
Glsi14g1077 614 SMART LRR_typ_2 404 426 IPR003591 -
Glsi14g1077 614 SMART LRR_typ_2 206 229 IPR003591 -
Glsi14g1077 614 Gene3D Ribonuclease Inhibitor 1 176 IPR032675 -
Glsi14g1077 614 SUPERFAMILY L domain-like 361 559 - -
Glsi14g1077 614 Pfam Leucine rich repeat 500 558 IPR001611 GO:0005515
Glsi14g1077 614 Pfam Leucine rich repeat 186 242 IPR001611 GO:0005515
Glsi14g1077 614 Pfam Leucine rich repeat 429 485 IPR001611 GO:0005515
Glsi14g1077 614 Pfam Leucine rich repeat 46 103 IPR001611 GO:0005515
Glsi14g1077 614 ProSiteProfiles Leucine-rich repeat profile. 500 522 IPR001611 GO:0005515
Glsi14g1077 614 ProSiteProfiles Leucine-rich repeat profile. 208 229 IPR001611 GO:0005515
Glsi14g1077 614 SMART LRR_sd22_2 159 181 - -
Glsi14g1077 614 SMART LRR_sd22_2 206 228 - -
Glsi14g1077 614 SMART LRR_sd22_2 90 112 - -
Glsi14g1077 614 SMART LRR_sd22_2 498 523 - -
Glsi14g1077 614 SUPERFAMILY L domain-like 41 317 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi14g1077 49 551 Receptor kinase-like Gene Family AT4G08850 29.623 6.20e-32 130
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Glsi14g1077 14 11818614 11830082 Glsi14g1077 14 11818614 11830082 ECH