Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi14g1074 ATGCGAAATGTAGCTCCACTCCCCCCAACCTTTTCTGCTCTGATATTTCCAGAACATTGTAAACCCCAGTTCATAAAATTTACAGTTCTGATGGCTCTCCAGGCTGCTTCTTTGGTTCCCGCTGCTTTCTCCCTTCCTAAAGAGGGAAAGTCTGGTGTATCCCTCAAGGACTCAACCCTATTTGGGCTTTCACTGTCAGATCATCTCAAAGCTGACTTCAGCTCTTCTGCATTGAGGTGCAAGAGGGAATTCCAACAAAAAGTTGGCGCTGTGAGAGCCCAGATAGTGGCTACTACAACTCCAGCACTTGACCGGGCTGCCCCAGAAGGCAAGAAAACGCTGAGAAAGGGCAGTGTTGTGGTCACTGGGGCCTCCTCTGGATTGGGTCTGGCCACTGCTAAGGCTTTGGCTGAGACTGGAAAGTGGCATGTAATTATGGCCTGCAGGGATTTCCTCAAAGCTGAAAGAGCTGCAAAATCTGCTGGCATCGCTAAGGAAAACTACACAATCATGCATTTAGACCTTGCCTCTCTTGACAGTGTCAGACAATTTGTAGATAACTTCAGGCGATCGGGCAGGCCACTTGATGTTCTGGTTTGCAATGCTGCAGTTTACTTGCCAACTGCTAAGGAACCTACATTCACTGCCGAAGGCTTTGAGCTCAGTGTTGGGACAAACCATCTGGGGCATTTTCTCCTTTCACGCTTACTGCTCGAGGACTTGAACAAATCTGATTATCCATCAAGACGCTTGATCATCGTTGGCTCAATCACAGGAAACACAAACACATTGGCTGGAAATGTGCCTCCCAAGGCGAACCTTGGTGACTTGAGGGGACTTGCTGGAGGCTTAAATGGGATAAACAGTTCAGCCATGATAGATGGTGGAGACTTTGACGGAGCCAAGGCATACAAGGACAGCAAAGTCTGCAACATGCTCAGCATGCAGGAGTTCCACAGAAGATACCATGAGGAAACTGGGATCACATTTGCTTCCCTTTACCCGGGTTGCATTGCCACAACAGGCTTGTTCAGAGAGCACATTCCCTTGTTCAGACTCTTATTTCCTCCATTCCAGAAGTACATAACCAAAGGCTTCGTCTCAGAAGATGAAGCAGGAAAGAGACTTGCTCAGGTTGTGAGTGATCCAAGCCTAACAAAATCCGGTGTTTACTGGAGCTGGAACAAGGACTCTGCGTCATTTGAAAACCAGTTGTCTCAAGAGGCTAGTGATGCAGAGAAGGCTCGCAAGATGTGGGAGGTGAGTGAGAAACTTGTTGGTTTGGCCTAA 1290 0.4806 MRNVAPLPPTFSALIFPEHCKPQFIKFTVLMALQAASLVPAAFSLPKEGKSGVSLKDSTLFGLSLSDHLKADFSSSALRCKREFQQKVGAVRAQIVATTTPALDRAAPEGKKTLRKGSVVVTGASSGLGLATAKALAETGKWHVIMACRDFLKAERAAKSAGIAKENYTIMHLDLASLDSVRQFVDNFRRSGRPLDVLVCNAAVYLPTAKEPTFTAEGFELSVGTNHLGHFLLSRLLLEDLNKSDYPSRRLIIVGSITGNTNTLAGNVPPKANLGDLRGLAGGLNGINSSAMIDGGDFDGAKAYKDSKVCNMLSMQEFHRRYHEETGITFASLYPGCIATTGLFREHIPLFRLLFPPFQKYITKGFVSEDEAGKRLAQVVSDPSLTKSGVYWSWNKDSASFENQLSQEASDAEKARKMWEVSEKLVGLA 429
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi14g1074 429 CDD LPOR_like_SDR_c_like 116 428 - -
Glsi14g1074 429 PANTHER PROTOCHLOROPHYLLIDE REDUCTASE C, CHLOROPLASTIC 31 429 IPR005979 GO:0016630
Glsi14g1074 429 NCBIfam protochlorophyllide reductase 115 429 IPR005979 GO:0016630
Glsi14g1074 429 Pfam short chain dehydrogenase 119 261 IPR002347 -
Glsi14g1074 429 PRINTS Glucose/ribitol dehydrogenase family signature 193 204 IPR002347 -
Glsi14g1074 429 PRINTS Glucose/ribitol dehydrogenase family signature 326 343 IPR002347 -
Glsi14g1074 429 PRINTS Glucose/ribitol dehydrogenase family signature 118 135 IPR002347 -
Glsi14g1074 429 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 114 397 IPR036291 -
Glsi14g1074 429 Gene3D - 107 429 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi14g1074 Glsi-ChrGlsi14 11797896 11800054 Dispersed/Transposed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Glsi14g1074 14 11797896 11800054 Glsi14g1074 14 11797896 11800054 ECH