Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi14g0966 ATGGCGAACCGGAACTTAGAAAAGATGGCATCCATTGATGCCCAGCTTCGGCAACTGGTTCCGGCCAAAGTGAGCGAGGATGACAAACTGGTTGAGTATGATGCTCTTCTCCTGGATCGGTTTCTTGATATTCTCCAGGATTTACATGGCGAGGATCTGAAGGAAACGGTTCAAGAAGTATATGAGCTTTCTGCTGAGTATGAAGGGAAGCATGACCCTCAGAAACTGGAGAAGCTTGGAAATGCTATAACCAGTTTGGATGCTGGGGACTCTATCGTTGTTGCAAAGTCCTTTTCGCACATGCTTAACTTGGCCAATTTAGCTGAGGAGGTCCAGATTGCTCACCGACGAAGAAACAAGTTGAAAAAAGGGGATTTTGCTGATGAGAACAATGCAACTACTGAATCAGACATTGAAGAAACTCTTAAGAAACTTGTGGAAATGAAGAAGTCCCCTCAAGAAGTTTTTGATGCCCTGAAAAACCAGACTGTTGATCTGGTTCTAACTGCTCATCCTACTCAATCAGTTCGAAGATCTTTGCTTCAGAAACATGGAAGGATTCGGAATTGCTTAGCTCAGTTGTATGCCAAAGACATCACTCCTGATGATAAGCAGGAGCTTGATGAGGCCCTACAGAGGGAGATTCAAGCTGCCTTCCGTACAGATGAAATCAGGAGGACCCCTCCAACACCGCAAGATGAGATGAGAGCAGGAATGAGCTACTTCCATGAAACAATCTGGAAGGGTGTCCCCAAATTTCTGCGCCGTGTTGATACAGCTTTGAAGAATATAGGGATTAATGAGCGTGTTCCTTATAATGCTCCTGTTATTCAATTTTCTTCTTGGATGGGTGGTGATCGTGATGGAAATCCAAGAGTAACTCCTGAAGTGACAAGGGATGTTTGCTTATTGGCTAGAATGATGGCTGCTAATTTGTATTATTCGCAGATAGAGGATCTTATGTTTGAGCTGTCAATGTGGCGCTGCAATGATGAGCTACGTGTCCGTGCAGATGAACTTCACAGGTCTTCTATTAAAGATGCAGTTGCAAAACACTATATAGAATTTTGGAAAAATATTCCCCCAAATGAACCATATCGTGTGATATTGGGTGAAGTAAGGAATAGGCTTTATCAGACTCGTGAGCGTTCACGGCATTTGCTTGCTAATGGGCACTCTGACATTCCAGAGGATGCAACTTTCACCCATGTCGAGGAGTTCTTGGAACCTCTCGAACTCTGTTATAGATCACTCTGTGCTTGTGGTGATCAAGCAATAGCTGATGGAAGCCTTCTTGATTTCTTGAGGCAAGTCTCCACTTTTGGACTGTCCCTAGTAAGGCTTGATATCAGGCAAGAGTCAGACCGCCATTCTGATGTGATGGATGCCATTACCAAACATTTGGAAATTGGCTCGTACCATGAATGGTCTGAAGAAAAGCGCCAGGAATGGCTTTTGTCTGAATTGAGTGGCAAACGCCCGCTGTTTGGACTTGATCTTCCCCAAACTGATGAAATTAAAGATGTTTTGGACACATTTCATGTCATAGCAGAGCTACCACCAGACAACTTTGGAGCATACATCATATCAATGGCAACTGCACCATCTGATGTGCTTGCAGTTGAACTTCTGCAACGAGAATGCCATGTCAAGCATCCATTAAGAGTTGTCCCATTGTTTGAGAAACTTGCGGATTTGGAGGCTGCTCCTGCTGCTTTGGCTCGGTTGTTCTCTGTGGACTGGTACAAAAATCGGATCAACGGGAAGCAAGAAGTCATGATTGGCTATTCAGATTCAGGGAAAGATGCTGGAAGGTTCTCTGCAGCATGGCAGCTCTATAAGGCTCAAGAGGAACTTATTAATGTAGCCAAGCAATATGGTGTCAAGCTAACCATGTTTCATGGTCGTGGTGGGACTGTTGGAAGGGGAGGCGGCCCCACCCACCTCGCCATCCTGTCTCAACCTCCAGAGACTATTCATGGATCACTTCGTGTAACAGTCCAAGGTGAAGTCATTGAGCAATCGTTTGGAGAGCACCACTTGTGTTTTAGAACACTTCAGCGTTATTCTGCTGCTACTCTAGAACATGGAATGCATCCCCCAATTTCCCCAAAACCAGAATGGCGTGCTCTGATGGATGAGATGGCAGTCATTGCCACAGAAGAATACCGTTCTGTTGTATTCAAAGAACCCCGATTTGTTGAGTATTTCCGCCTGGCTACTCCGGAGTTGGAGTATGGTCGGATGAACATCGGAAGTCGACCAGCAAAGCGAAGGCCAAGTGGGGGTATTGAAACACTCCGTGCAATACCTTGGATCTTTGCTTGGACACAAACAAGGTTTCATCTTCCAGTGTGGCTTGGCTTTGGGGCAGCATTCAAACATGTTATTGAGAAGGATGTCAGGAACCTTCATATGCTGCGAGAGATGTACAATCAATGGCCTTTCTTTAGGGTCACCCTTGATTTAGTGGAAATGGTGTTTGCCAAGGGAGACCCTGGGATAGCTGCTCTGTATGATAAGCTCCTTGTTTCACCAGACCTGTTGCCTTTTGGGGAACTGTTGAGGGCCAAGTATGAAGAAACTAAGAAACTCCTCCTTCAGGTGGCTGGGCACAAGGATCTTCTTGAAGCAGACCCATACTTGAAGCAAAGACTTCGCTTGCGTGATTCTTACATTACTACCCTGAATGTTTGCCAAGCTTACACATTGAAACGCGTTCGTGATCCGAACTACAACGTGAAGGTGCGCCCCCACATGTCTAAAGAGTCTATGGAAATAAGTAAACCAGCGGATGAACTTATAACACTGAACCCAACAAGCGAATATGCCCCTGGTTTGGAAGACACCCTCATTCTCACCATGAAGGGTATTGCTGCTGGCCTGCAGAACACTGGTTAA 2901 0.4547 MANRNLEKMASIDAQLRQLVPAKVSEDDKLVEYDALLLDRFLDILQDLHGEDLKETVQEVYELSAEYEGKHDPQKLEKLGNAITSLDAGDSIVVAKSFSHMLNLANLAEEVQIAHRRRNKLKKGDFADENNATTESDIEETLKKLVEMKKSPQEVFDALKNQTVDLVLTAHPTQSVRRSLLQKHGRIRNCLAQLYAKDITPDDKQELDEALQREIQAAFRTDEIRRTPPTPQDEMRAGMSYFHETIWKGVPKFLRRVDTALKNIGINERVPYNAPVIQFSSWMGGDRDGNPRVTPEVTRDVCLLARMMAANLYYSQIEDLMFELSMWRCNDELRVRADELHRSSIKDAVAKHYIEFWKNIPPNEPYRVILGEVRNRLYQTRERSRHLLANGHSDIPEDATFTHVEEFLEPLELCYRSLCACGDQAIADGSLLDFLRQVSTFGLSLVRLDIRQESDRHSDVMDAITKHLEIGSYHEWSEEKRQEWLLSELSGKRPLFGLDLPQTDEIKDVLDTFHVIAELPPDNFGAYIISMATAPSDVLAVELLQRECHVKHPLRVVPLFEKLADLEAAPAALARLFSVDWYKNRINGKQEVMIGYSDSGKDAGRFSAAWQLYKAQEELINVAKQYGVKLTMFHGRGGTVGRGGGPTHLAILSQPPETIHGSLRVTVQGEVIEQSFGEHHLCFRTLQRYSAATLEHGMHPPISPKPEWRALMDEMAVIATEEYRSVVFKEPRFVEYFRLATPELEYGRMNIGSRPAKRRPSGGIETLRAIPWIFAWTQTRFHLPVWLGFGAAFKHVIEKDVRNLHMLREMYNQWPFFRVTLDLVEMVFAKGDPGIAALYDKLLVSPDLLPFGELLRAKYEETKKLLLQVAGHKDLLEADPYLKQRLRLRDSYITTLNVCQAYTLKRVRDPNYNVKVRPHMSKESMEISKPADELITLNPTSEYAPGLEDTLILTMKGIAAGLQNTG 966
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi14g0966 966 PANTHER PHOSPHOENOLPYRUVATE CARBOXYLASE 4 966 IPR021135 GO:0006099|GO:0008964|GO:0015977
Glsi14g0966 966 ProSitePatterns Phosphoenolpyruvate carboxylase active site 2. 592 604 IPR033129 -
Glsi14g0966 966 Pfam Phosphoenolpyruvate carboxylase 36 966 IPR021135 GO:0006099|GO:0008964|GO:0015977
Glsi14g0966 966 FunFam Phosphoenolpyruvate carboxylase 1 307 444 - -
Glsi14g0966 966 PRINTS Phosphoenolpyruvate carboxylase signature 219 235 IPR021135 GO:0006099|GO:0008964|GO:0015977
Glsi14g0966 966 PRINTS Phosphoenolpyruvate carboxylase signature 632 661 IPR021135 GO:0006099|GO:0008964|GO:0015977
Glsi14g0966 966 PRINTS Phosphoenolpyruvate carboxylase signature 590 610 IPR021135 GO:0006099|GO:0008964|GO:0015977
Glsi14g0966 966 PRINTS Phosphoenolpyruvate carboxylase signature 441 461 IPR021135 GO:0006099|GO:0008964|GO:0015977
Glsi14g0966 966 PRINTS Phosphoenolpyruvate carboxylase signature 279 294 IPR021135 GO:0006099|GO:0008964|GO:0015977
Glsi14g0966 966 PRINTS Phosphoenolpyruvate carboxylase signature 764 790 IPR021135 GO:0006099|GO:0008964|GO:0015977
Glsi14g0966 966 PRINTS Phosphoenolpyruvate carboxylase signature 166 179 IPR021135 GO:0006099|GO:0008964|GO:0015977
Glsi14g0966 966 Hamap Phosphoenolpyruvate carboxylase [ppc]. 23 966 IPR022805 GO:0006099|GO:0008964|GO:0015977
Glsi14g0966 966 Coils Coil 104 124 - -
Glsi14g0966 966 SUPERFAMILY Phosphoenolpyruvate/pyruvate domain 33 966 IPR015813 GO:0003824
Glsi14g0966 966 Gene3D Phosphoenolpyruvate/pyruvate domain 307 444 - -
Glsi14g0966 966 ProSitePatterns Phosphoenolpyruvate carboxylase active site 1. 167 178 IPR018129 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi14g0966 Glsi-ChrGlsi14 11055094 11060804 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Glsi14g0966 14 11055094 11060804 Glsi04g1257 04 12931197 12938690 CCT
Glsi14g0966 14 11055094 11060804 Glsi14g0966 14 11055094 11060804 ECH