Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi14g0944 ATGAACATTTGTGAAGCAGGACTCTCAAAAACTTGCCATTCTGCTAAAACAATCGACACTCCCCTCCACCGAACACCATCCCCTGTCCCCTCCCTGTTTCTGAATCTGAGTCAGAATCCATCTCTCTTTCAATCGCTGATCCTTAATACGCCGCTTTCATCTTCGCTTGGTAAGATGGGAGGTGGGTTTAGAGTGCTTCACTTAGTTAGACCATTTCTCTCATTTCTTCCTGAAGTTCAGACTGCGGACAGGAAAATCCCATTTAGGGAGAAGGTCATATATACTGTGATATCTCTGTTCATTTTCCTGGTTTGTAGTCAACTCCCTCTGTATGGAATACACTCAACAACAGGTGCAGATCCATTCTATTGGATGCGTGTTATACTTGCTTCAAACCGTGGAACTGTTATGGAGCTGGGAATCACACCCATCGTGACTTCTGGGCTGGTTATGCAACTTTTGGCTGGATCCAAGATCATTGAAGTGGACAACAATGTACGTGAAGATCGTGCCCTCTTAAATGGAGCACAGAAGCTACTTGGCATCTTGATAGCTGTCGGAGAGGCTGTTGCCTATGTTCTTTCTGGGATGTATGGCAGTGTGGGCCAACTTGGAGTAGGAAATGCTATCCTCATAATCATTCAGCTCTGCTTTGCTGGTATCATTGTGATATGTTTAGATGAGCTTCTTCAAAAAGGATATGGTCTAGGGTCTGGAATTTCCCTATTCATTGCAACTAATATCTGTGAAAATATTATATGGAAGGCTTTTAGTCCCACCACCATTAACAGTGGACGGGGCGCTGAATTTGAGGGTGCTGTTATTGCTCTGTTCCATTTGTTGATAACTAGGACAGACAAAGTCCGTGCTCTTCGTGAGGCATTTTACCGGCAGAATCTTCCCAATGTGACAAATTTGCTTGCTACTGTCTTGATCTTCCTAATTGTGATATACTTCCAAGGTTTCCGTGTGGTGTTGCCTGTAAGATCAAAGAATGCTCGTGGACAGCAGGGCTCATATCCTATTAAACTATTTTATACCTCCAACATGCCCATTATTCTTCAGTCTGCCCTTGTTTCCAATCTCTATTTCATCTCCCAGCTGCTTCACCGAAAGTATAGTGGAAACTTCTTCGTGAATTTGTTGGGCAAATGGAAGGAAACTGAATATGGAGGTGGTCAGTCTATTCCCGTTGGTGGTATTGCATACTACATTACTGCACCATCTAGCTTAGCCGATATGGCAGCCAATCCTTTCCATGCGTTGTTCTATTTTGTGTTCATGTTGTCAGCCTGTGCCTTGTTCTCTAAAACTTGGATTGAAGTCTCTGGATCGTCTGCTAAAGATGTTGCCAAGCAGCTTAAGGAACAACAAATGGTGATGCCTGGGCACCGTGAGTCGAACTTACAAAAAGAGCTGAACCGATATATTCCCACTGCTGCAGCATTTGGAGGCATGTGTATTGGTGCCCTAACCGTGTTAGCTGATTTCATGGGGGCAATTGGTTCAGGTACAGGGATATTGCTTGCAGTAACAATTATCTATCAGTACTTCGAGACATTTGAGAAGGAGAGAGCTAGTGAGCTTGGCTTCTTTGGTTTCTAA 1605 0.438 MNICEAGLSKTCHSAKTIDTPLHRTPSPVPSLFLNLSQNPSLFQSLILNTPLSSSLGKMGGGFRVLHLVRPFLSFLPEVQTADRKIPFREKVIYTVISLFIFLVCSQLPLYGIHSTTGADPFYWMRVILASNRGTVMELGITPIVTSGLVMQLLAGSKIIEVDNNVREDRALLNGAQKLLGILIAVGEAVAYVLSGMYGSVGQLGVGNAILIIIQLCFAGIIVICLDELLQKGYGLGSGISLFIATNICENIIWKAFSPTTINSGRGAEFEGAVIALFHLLITRTDKVRALREAFYRQNLPNVTNLLATVLIFLIVIYFQGFRVVLPVRSKNARGQQGSYPIKLFYTSNMPIILQSALVSNLYFISQLLHRKYSGNFFVNLLGKWKETEYGGGQSIPVGGIAYYITAPSSLADMAANPFHALFYFVFMLSACALFSKTWIEVSGSSAKDVAKQLKEQQMVMPGHRESNLQKELNRYIPTAAAFGGMCIGALTVLADFMGAIGSGTGILLAVTIIYQYFETFEKERASELGFFGF 534
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi14g0944 534 Pfam SecY 135 517 IPR002208 GO:0015031|GO:0016020
Glsi14g0944 534 NCBIfam preprotein translocase subunit SecY 89 525 IPR002208 GO:0015031|GO:0016020
Glsi14g0944 534 Pfam Plug domain of Sec61p 100 134 IPR019561 -
Glsi14g0944 534 ProSitePatterns Protein secY signature 1. 135 154 IPR030659 -
Glsi14g0944 534 SUPERFAMILY Preprotein translocase SecY subunit 68 524 IPR023201 -
Glsi14g0944 534 Gene3D SecY subunit domain 67 532 IPR023201 -
Glsi14g0944 534 PANTHER SECY/SEC61-ALPHA FAMILY MEMBER 76 528 IPR002208 GO:0015031|GO:0016020
Glsi14g0944 534 FunFam Transport Sec61 subunit alpha isoform 2 67 532 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi14g0944 Glsi-ChrGlsi14 10937037 10940962 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi14g0944 59 534 Miscellaneous Gene Families AT2G34250 93.067 0.0 908
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Glsi14g0944 14 10937037 10940962 Glsi14g0944 14 10937037 10940962 ECH