Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi14g0658 ATGCTTCTCCAACTGCGAGTTGAAGATGCGATGGGCAACCTCTTTTCTAAAAAGCGTCACGCTCCATTTTCCAGAGACGCTAAAGGAGAAAGCAGGAGTAGTAGTTCCTCCAACCTAAGAAGCAGACCTGCGACCTACCTTCAGCCACCGCCGCCGACGTCACAGCCTCCGCGAGCTCATTCAATGAACAAAAAACCGAGTTTCGGTGAGCATTCTTCGGGAAAAACCTCAATAGTAGAAAGGAAGCTATCTGCGAAGAAGAAATATGCTTTGATTCCTGATCACTTCACTACCCTCGAACAGGTTACAGCGGCCTTGAGGAAAGAAGGCTTAGAATCATCAAATCTCATCCTTGGAATTGATTTCACCAAGAGCAACGAATGGACTGGCAGAATGTCATTCAATAATAGAAGCCTGCATGCTATTGGAGATACACCGAACCCTTATGAGAAGGCCATCTCTATTATCGGCAAGACTTTGGCTCCCTTTGATGATGACAACTTAATTCCTTGTTTTGGCTTTGGTGATGCTACCACTCATGATCAAGAAGTGTTTAGCTTTCACAGTGATCATTCACCCTGCCATGGTTTTGAGGAAGTTCTTGCTTGCTACCAAAAAATAGTTCCAAACTTGAAACTTTCAGGGCCAACTTCTTACGGTCCAGTGATTGATGCTGCCATAGACATAGTTGAGAAGAATCATGGCCAATTCCATGTGTTGGTTATCGTTGCAGATGGCCAGGTTACAAGAAGTGTCAACTATGAAGATGGAGAACTCAGTCCTCAAGAAGAGAGGACCATCCAATCAATTGTTGATGCAAGTTCATATCCGCTTTCTATTGTTCTTGTTGGAGTTGGTGATGGACCATGGGAAGACATGAAAAAGTTTGATGACAAGATACCTGCACGTGATTTTGACAATTTTCAGTTTGTTAATTTCACTGGCATTATGTCTAGAAATGCAAGCCCCTCTGAGAAAGAAGCAGCTTTTGCTCTGGCTGCTCTTATGGAGATACCATTCCAGTACAAAGCAGTCGTTGAACTTGGAATTCTTGGACGAGTAACAGGAAGGGCAAGGAAAATAGTTCCACGACCACCTCCAGTTCCTTATTCTCGACCAGTGCCACCTGCTCGTGTACTGAGCAATATGACAGCATCCCCAGCTGATGAGCAAAACCAGATGGTATGCCCTATTTGCCTGACAAATGGAAAGGACTTGGCCTTTCAATGTGGGCACATGACTTGCAGAGATTGTGGATCCAGGTTAACCAACTGTCCCATATGCCGAGTGAGGATCACCAATCGTCTCAGGGTGTTCACTGGGTGA 1326 0.4495 MLLQLRVEDAMGNLFSKKRHAPFSRDAKGESRSSSSSNLRSRPATYLQPPPPTSQPPRAHSMNKKPSFGEHSSGKTSIVERKLSAKKKYALIPDHFTTLEQVTAALRKEGLESSNLILGIDFTKSNEWTGRMSFNNRSLHAIGDTPNPYEKAISIIGKTLAPFDDDNLIPCFGFGDATTHDQEVFSFHSDHSPCHGFEEVLACYQKIVPNLKLSGPTSYGPVIDAAIDIVEKNHGQFHVLVIVADGQVTRSVNYEDGELSPQEERTIQSIVDASSYPLSIVLVGVGDGPWEDMKKFDDKIPARDFDNFQFVNFTGIMSRNASPSEKEAAFALAALMEIPFQYKAVVELGILGRVTGRARKIVPRPPPVPYSRPVPPARVLSNMTASPADEQNQMVCPICLTNGKDLAFQCGHMTCRDCGSRLTNCPICRVRITNRLRVFTG 441
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi14g0658 441 Pfam Copine 138 351 IPR010734 -
Glsi14g0658 441 Pfam Zinc finger, C3HC4 type (RING finger) 393 433 - -
Glsi14g0658 441 SMART VWA_4 113 316 IPR002035 -
Glsi14g0658 441 SUPERFAMILY vWA-like 114 296 IPR036465 -
Glsi14g0658 441 PANTHER COPINE FAMILY PROTEIN 1 56 416 - -
Glsi14g0658 441 SMART ring_2 396 428 IPR001841 -
Glsi14g0658 441 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 379 441 IPR013083 -
Glsi14g0658 441 MobiDBLite consensus disorder prediction 58 74 - -
Glsi14g0658 441 MobiDBLite consensus disorder prediction 28 44 - -
Glsi14g0658 441 ProSiteProfiles Zinc finger RING-type profile. 396 429 IPR001841 -
Glsi14g0658 441 MobiDBLite consensus disorder prediction 16 79 - -
Glsi14g0658 441 SUPERFAMILY RING/U-box 384 435 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi14g0658 Glsi-ChrGlsi14 7304131 7314147 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Glsi14g0658 14 7304131 7314147 Glsi14g0658 14 7304131 7314147 ECH