Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi13g1379 ATGGGGAAGAAGACGAAGAAGCCCGGGAAAGGCAAAGAGAAAACAGAGCGAAAAACTGCGAAAGCAGAGGAGAAGAGAGCTCGTAGGGAGACCAAGAAGATTTCTCCCGAGGACGACATTGATGCCATATTGTTGAGTATACAAAAGGAGGAAGCCAAAAAGAAGGAAGTCCACATTGAAGACAATGTTCCTGCACCTACTCCTAGATCCAACTGTACGCTCACAGTCAATCCGTTGAAAGAGGCAGAGTTGATTCTTTATGGGGGTGAATTTTACAATGGTAACAAGACTTTTGTATATGGTGATCTTTACCGGTATGATGTGGAGAAGCTAGAATGGAAATTAGTTTCAAGTCCTAATAGTCCTCCCCCTCGGAGTGCTCATCAGGCAGTTGCTTGGAAGAATTATCTTTATATTTTTGGTGGTGAATTCACATCTCCAAACCAAGAGCGGTTTCATCACTACAAGGATTTTTGGATGTTGGACCTTAAAACAAATCAGTGGGAACAACTTAATTTGAAAGGGTGCCCTAGTCCACGCTCAGGACATCGAATGGTATTGTACAAGCACAAGATTATTGTTTTTGGTGGATTCTATGACACTCTTAGAGAAGTGAGGTACTACAATGATCTATTTGTATTTGACCTTGATCAATTTAAGTGGCAAGAAATAAAGCCTAAGCCTGGAGCGATGTGGCCAAGTGGGCGGAGTGGTTTTCAATTATTTGTTCACCAAGATGAGATTTTTTTGTATGGAGGCTATTCAAAAGAAGTTTCATCTGATAAGAGCATTACTGAGAAAGGGATTGTTCATTCAGACATCTGGTCCCTTGATCCTAAGACTTGGGAATGGAACAAGGTTAAGAAAAGTGGAATGCCTCCTGGGCCTCGTGCTGGGTTTTCCATGTGTGTTCATAAGAGGAGGGCTGTGCTATTTGGTGGTGTTGTGGATATGGAAGTTGAAGGTGATAAAATAATGAGCTTGTTCTTGAACGAGCTTTATGGCTTTCAATTAGACAGCCAACGATGGTATCCGCTGGAGTTAAGAAAGGAGAAGTCAACGAAAGATAAGTTAAAAAAGAATGAACAGAGGCATACTAATGATGTTGATAGCAAGAGAAACCCACAAATTGAAGCAAGAGAAGAAAATGAGTATTCAGAATGCCCTGAAGAAGCAAGCAACATGGGAAGCAATATTGACAATTTATCCCAGAATATTAAATCAAACATGAATATTACCGATGGTGTAAAAGTTGTGGAATCTGAAAGGAAGCTTCAGGAATTAGACATTCAAAGTTCTTTGCCTGAGGTAGTGAAGCCTTGTGGACGTATTAATTCCTGCATGGTTGTTGCAAGAGATACATTATATATATATGGTGGAATGATGGAGATTAAAGATCAAGAATTCACTCTTGATGACTTGTATTCTCTGAACCTTAGTAAACTTGATGAATGGAAGTGCATTATACCGGCATCAGAATCTGAATGGGTGGAAGTTTCAGAGGATGATGATGATGAAGATGAAGATGGTGAAGATGAATCTGATGATGATATTACAAGTGATGAAAATGAAGATGATGATGATGATGAAGATGAGGATGAGGATGAGAATGCATCAGTTCAGGTGGGAGACGCGGTTGCTTTAATTAGGGGTGGGGGGAAAAATCTGCGAAGAAAAGAAAGAAGGTCACGAATAGAGCAGATCAGAGCAAGCCTTGGCTTGTCAGATTCACAAAGAACGCCAGTGCCGGGAGAATCCTTGAGAGATTTCTATAGACGTACAAATTTGTATTGGCAAATGGCGGCCCATGAACATACACAACACACTGGGAAGGAACTCCGCAAGGATGGTTTTGATCTTGCTGAAGCTCGGTACAGAGAGCTAAAGCCTATTCTTGATGAGCTGGCCCTGTTAGAATCTGAGCAGAAAGCTGAAGAGGACGAAGGGCCTGAAACGAGTTCAAAGAAAAGAGGCAAGAAGAAAACTAGAAACTGA 1995 0.4115 MGKKTKKPGKGKEKTERKTAKAEEKRARRETKKISPEDDIDAILLSIQKEEAKKKEVHIEDNVPAPTPRSNCTLTVNPLKEAELILYGGEFYNGNKTFVYGDLYRYDVEKLEWKLVSSPNSPPPRSAHQAVAWKNYLYIFGGEFTSPNQERFHHYKDFWMLDLKTNQWEQLNLKGCPSPRSGHRMVLYKHKIIVFGGFYDTLREVRYYNDLFVFDLDQFKWQEIKPKPGAMWPSGRSGFQLFVHQDEIFLYGGYSKEVSSDKSITEKGIVHSDIWSLDPKTWEWNKVKKSGMPPGPRAGFSMCVHKRRAVLFGGVVDMEVEGDKIMSLFLNELYGFQLDSQRWYPLELRKEKSTKDKLKKNEQRHTNDVDSKRNPQIEAREENEYSECPEEASNMGSNIDNLSQNIKSNMNITDGVKVVESERKLQELDIQSSLPEVVKPCGRINSCMVVARDTLYIYGGMMEIKDQEFTLDDLYSLNLSKLDEWKCIIPASESEWVEVSEDDDDEDEDGEDESDDDITSDENEDDDDDEDEDEDENASVQVGDAVALIRGGGKNLRRKERRSRIEQIRASLGLSDSQRTPVPGESLRDFYRRTNLYWQMAAHEHTQHTGKELRKDGFDLAEARYRELKPILDELALLESEQKAEEDEGPETSSKKRGKKKTRN 664
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi13g1379 664 MobiDBLite consensus disorder prediction 354 387 - -
Glsi13g1379 664 Pfam Galactose oxidase, central domain 68 122 - -
Glsi13g1379 664 PANTHER KELCH DOMAIN-CONTAINING PROTEIN 1 657 - -
Glsi13g1379 664 Pfam Domain of unknown function (DUF4110) 573 658 IPR025183 -
Glsi13g1379 664 MobiDBLite consensus disorder prediction 12 35 - -
Glsi13g1379 664 MobiDBLite consensus disorder prediction 496 544 - -
Glsi13g1379 664 MobiDBLite consensus disorder prediction 640 664 - -
Glsi13g1379 664 SUPERFAMILY Kelch motif 83 487 IPR015915 GO:0005515
Glsi13g1379 664 Coils Coil 12 32 - -
Glsi13g1379 664 Pfam Kelch motif 232 281 - -
Glsi13g1379 664 Pfam Kelch motif 440 479 - -
Glsi13g1379 664 MobiDBLite consensus disorder prediction 640 655 - -
Glsi13g1379 664 Pfam Galactose oxidase, central domain 135 187 - -
Glsi13g1379 664 MobiDBLite consensus disorder prediction 496 539 - -
Glsi13g1379 664 MobiDBLite consensus disorder prediction 354 400 - -
Glsi13g1379 664 Coils Coil 348 368 - -
Glsi13g1379 664 MobiDBLite consensus disorder prediction 1 35 - -
Glsi13g1379 664 Gene3D - 43 370 IPR015915 GO:0005515
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi13g1379 166 343 Acyl Lipid Metabolism Gene Families AT3G05420 26.984 1.43e-11 65.9
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Glsi13g1379 13 30949971 30959261 Glsi13g1379 13 30949971 30959261 ECH