Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi13g1355 ATGGGTGGATCAATTTCAAAACGGAGGAGCTTGAGGCATCGTTTATCTTCAAGGTCCAGTTCACGTTCGTGGAGTTATCCTCAACCGCAATCATCCTATGAGCAACAGAACCGAGATCATGTGCCTCAGGAACATTACGGGCCTCCATCTCAAAGCTATGGTGGTGGTCGTGCTCCGGAGCCAAGAAAGAGGTTAGAGAGGAAGTATTCAAGGATAGATGACAACTATATTAGCTTGGACCAGGTAACCGAGGCTCTAGCAGGTGCGGGTCTTGAGTCTTCCAATCTAATTGTTGGTATTGATTTCACAAAGAGCAATGAGTGGACAGGTGCAAGGTCCTTCCAAAGGAGAAGCCTGCATCACATTGGTCATGAACAAAATCCCTATGAGCAAGCAATATCCATCATTGGGAAAACATTGTCCTCCTTTGATGAGGATAACTTAATTCCCTGCTTTGGATTTGGAGATGCATCAACACACGATCAAGAAGTTTTTAGTTTCTATCCGGATGAGAGATTTTGTCATGGATTTGAAGAAGTCTTGAGACGGTACCGGGAATTGGTTCCTGAATTAAGGCTAGCAGGACCAACATCATTTGCCCCAATTATTGAAATGGCAATCACTATAGTTGAGCAAAGTGGTGGCCAATACCATGTCTTATTGATAATAGCTGATGGACAAGTTACAAGAAGTGTTGACACCGAGCGTGGGCAGTTAAGCACGCAAGAAAAACAAACTGTTGAAGCTATTGTGAAAGCAAGTGATTATCCCTTGTCAATCATATTAGTTGGAGTTGGAGATGGGCCATGGGACATGATGAGAGAATTTGATGATAACATACCAGCCCGGGCCTTTGATAACTTCCAGTTTGTGAATTTCACTGAAATAATGTCAAAGAGTATGGATCGTTCCAGAAAAGAAACAGAATTTGCACTTGCTGCCTTGATGGAAATACCTTCCCAGTATAAGGCAACACTAGAACTTAATATATTGGGTGCTCGTAGAGGGAAAGCTATAGACAGGGTTCCTCTTCCCCCACCTCTATATGGTGCAGCATCTTTCAATACCACAAAACCTTCTCGTTCAAGCAGTTTTAGTCCTAGCGCACCATCTCACAGACATGATGATGGCGCAGATCGTCCTGCAAGTTCTGCTTCTGATAATCATGTGTGTCCCATTTGCCTCTGCAATCCCAAGGATTTGGCCTTTGGTTGCGGGCATCAGACATGCTGTGATTGCGGACAAGATCTTGAGACATGCCCCATTTGCAGGAGTACCATTGATACTCGAATAAAACTTTATTAG 1305 0.4375 MGGSISKRRSLRHRLSSRSSSRSWSYPQPQSSYEQQNRDHVPQEHYGPPSQSYGGGRAPEPRKRLERKYSRIDDNYISLDQVTEALAGAGLESSNLIVGIDFTKSNEWTGARSFQRRSLHHIGHEQNPYEQAISIIGKTLSSFDEDNLIPCFGFGDASTHDQEVFSFYPDERFCHGFEEVLRRYRELVPELRLAGPTSFAPIIEMAITIVEQSGGQYHVLLIIADGQVTRSVDTERGQLSTQEKQTVEAIVKASDYPLSIILVGVGDGPWDMMREFDDNIPARAFDNFQFVNFTEIMSKSMDRSRKETEFALAALMEIPSQYKATLELNILGARRGKAIDRVPLPPPLYGAASFNTTKPSRSSSFSPSAPSHRHDDGADRPASSASDNHVCPICLCNPKDLAFGCGHQTCCDCGQDLETCPICRSTIDTRIKLY 434
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi13g1355 434 MobiDBLite consensus disorder prediction 17 37 - -
Glsi13g1355 434 SUPERFAMILY RING/U-box 386 430 - -
Glsi13g1355 434 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 371 434 IPR013083 -
Glsi13g1355 434 ProSiteProfiles Zinc finger RING-type profile. 391 424 IPR001841 -
Glsi13g1355 434 SMART VWA_4 93 296 IPR002035 -
Glsi13g1355 434 Pfam Zinc finger, C3HC4 type (RING finger) 388 429 - -
Glsi13g1355 434 PANTHER COPINE FAMILY PROTEIN 1 19 411 - -
Glsi13g1355 434 MobiDBLite consensus disorder prediction 353 370 - -
Glsi13g1355 434 Pfam Copine 118 331 IPR010734 -
Glsi13g1355 434 MobiDBLite consensus disorder prediction 353 382 - -
Glsi13g1355 434 MobiDBLite consensus disorder prediction 1 62 - -
Glsi13g1355 434 SUPERFAMILY vWA-like 95 277 IPR036465 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi13g1355 Glsi-ChrGlsi13 30813724 30817027 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Glsi13g1355 13 30813724 30817027 Glsi13g1355 13 30813724 30817027 ECH